Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1540 ATGGAAAATGACCTTCAGGACTTGATATCCAGAGCTAGATCTTCTCTAGCTGTGTTTCTTGTTGTTTTTCCTCAAAAGGAACGTGACCAATTCATTGATGAAACATTGATTCGAGAATTTCCATCATGGGTTACAAGCAAAGATAGGAGGCTTTTGGAGTCCTCAGTTGGGGACATAAAGGCAAATGTTGTGGTGGCCAAAGATGGGAGTGGCAAGTTCAAGACTGTGGCTGAGGCTGTGGCATCTGCACCTGACAACGGTAAGACAAAGTATGTTATCTATGTGAAAAAGGGAACATACAAAGAGAATGTAGAAATTGGTTCGAAAAAAACAAATGTTATGCTCGTTGGTGATGGTATGGATGCAACAATAATCACAGGCAACTTAAATTTCATCGATGGTACAACCACCTTCAAAAGTTCAACTGTCGCTGCGGTTGGGGATGGGTTTATAGCACAAGACATTTGGTTCCAAAACACGGCAGGACCAGAGAAGCACCAGGCAGTGGCTCTCCGCGTTGGCTCTGACCAATCTGTCATCAACCGTTGCCGCATTGACGCCTTTCAAGACACTCTTTACGCACACTCTAACCGGCAATTTTACCGTGACTCCGTCATTACAGGTACCATTGACTTCATCTTTGGAAACGCAGCTGTTGTGTTCCAGAAGTGCAAGTTGGTGGCCCGTAAACCCATGGCCAACCAAAACAACATGTTTACAGCCCAAGGTCGAGAGGACCCAGGTCAGAACACAGGAACTTCAATTCAACAATGTGACCTAACACCAAGTTCGGACCTTAAGCCCGTTGTGGGCTCGATCAAAACATTTCTCGGCCGCCCGTGGAAGAAATACTCCAGGACTGTTGTGATGCAATCCTTTCTGGACAGTCACATTGACCCAACAGGATGGGCTGAGTGGGATGCCGCGAGTAAGGACTTTCTGCAAACATTGTATTACGGAGAGTACATGAACAATGGACCAGGGGCTGGTACCGCCAAGAGAGTCACTTGGCCAGGTTATCGTGTCATCAAAACTGCTGCAGAGGCTAGCAAGTTTACAGTAGCTCAACTAATCCAAGGTAATGTTTGGTTGAAGAACACAGGGGTGACCTTTACTGAGGGTTTGTAA 1128 0.461 MENDLQDLISRARSSLAVFLVVFPQKERDQFIDETLIREFPSWVTSKDRRLLESSVGDIKANVVVAKDGSGKFKTVAEAVASAPDNGKTKYVIYVKKGTYKENVEIGSKKTNVMLVGDGMDATIITGNLNFIDGTTTFKSSTVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVGSDQSVINRCRIDAFQDTLYAHSNRQFYRDSVITGTIDFIFGNAAVVFQKCKLVARKPMANQNNMFTAQGREDPGQNTGTSIQQCDLTPSSDLKPVVGSIKTFLGRPWKKYSRTVVMQSFLDSHIDPTGWAEWDAASKDFLQTLYYGEYMNNGPGAGTAKRVTWPGYRVIKTAAEASKFTVAQLIQGNVWLKNTGVTFTEGL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1540 375 Gene3D - 56 375 IPR012334 -
Mal3g1540 375 PANTHER PECTINESTERASE 1 373 - -
Mal3g1540 375 ProSitePatterns Pectinesterase signature 2. 206 215 IPR033131 -
Mal3g1540 375 SUPERFAMILY Pectin lyase-like 60 374 IPR011050 -
Mal3g1540 375 ProSitePatterns Pectinesterase signature 1. 87 106 IPR018040 -
Mal3g1540 375 Pfam Pectinesterase 62 361 IPR000070 GO:0030599|GO:0042545
Mal3g1540 375 PANTHER PECTINESTERASE 1 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1540 Mal-Chr3 66548062 66549490 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1540 5 375 Carbohydrate Esterase AT1G11580 68.717 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1540 K01051 - gmx:100815836 672.93