Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1539 ATGGAAAGTGAACTTCAGGACTTAATATCAAGAGCTAGATCTTCTCTAGCCGTGCTTGTTTCCGTTTTACCTCCAAAGGATCATGATGGATTCATTGATGAATCACTGAATGGTGACTTTCCCTCTTGGGTAACAAGTAAGGATCGAAGGCTTTTGGAGTCTTCAGTTGCGGACATAAAGGCCAATGTTGTGGTGGCTAAAGATGGGAGCGGTAAGTTCAAGACTGTGGCTGAGGCTGTGGCATCGGCACCTAACAAAGGAAAGACAAGGTATGTTATCTATGTGAAAAAGGGAACATACAAAGAGAATGTTGAAATCGGTAGCTCAAAGACGAACGTGATGCTCGTGGGTGATGGTATGGATGCAACGATAATCACAGGCAGCTTAAATTACATTGATGGAACAGGCACCTTCCAAAGTGCAACTGTTGCTGCTGTTGGGGATGGATTTATAGCTCAGGACATTGGATTCAAAAACACGGCTGGCCCAGAAAAGCACCAGGCAGTTGCTCTTCGCGTCGGCTCTGATCAATCTGTCATCAACCGCTGCAAAATTGACGCATTTCAAGACACTCTCTACGCACACTCCAACCGACAATTTTACCGTGACTCCTTCATTACCGGTACCATTGACTTTATCTTTGGAAACGCAGCTGTTGTGTTGCAGAAGTGCAAACTCGTGGCCCGAAAGCCAATGAGCAACCAAAAGAACATGGTCACAGCCCAAGGTCGACTAGACCCAAACCAGAACACTGCAACATCAATTCAGCAATGTGACGTAATACCAAGCACGGACCTCAAGCCTGTGATAGGCCCCATCAAAACTTACTTAGGCCGCCCATGGAAGAAATACTCCAGGACTGTTGTAATGCAGTCCTTGTTAAGCACACACATTGACCCAGCAGGATGGGCTGAATGGGATGCCGCGAGTAAGGACTTTCTGCAAACACTGTATTACGGAGAGTACATGAACAAAGGACCCGGTGCTGGTACCAGCAAGAGAGTGAACTGGCCTGGTTATCATGTTATCAAAAATGCTGCAGAGGCCAGCAAGTTTACAGTAGCACAACTCATCCAAGGTAATGTTTGGTTGAAGAACACAGGGGTGGCCTTCATCGCAGGCCTGTAG 1128 0.4672 MESELQDLISRARSSLAVLVSVLPPKDHDGFIDESLNGDFPSWVTSKDRRLLESSVADIKANVVVAKDGSGKFKTVAEAVASAPNKGKTRYVIYVKKGTYKENVEIGSSKTNVMLVGDGMDATIITGSLNYIDGTGTFQSATVAAVGDGFIAQDIGFKNTAGPEKHQAVALRVGSDQSVINRCKIDAFQDTLYAHSNRQFYRDSFITGTIDFIFGNAAVVLQKCKLVARKPMSNQKNMVTAQGRLDPNQNTATSIQQCDVIPSTDLKPVIGPIKTYLGRPWKKYSRTVVMQSLLSTHIDPAGWAEWDAASKDFLQTLYYGEYMNKGPGAGTSKRVNWPGYHVIKNAAEASKFTVAQLIQGNVWLKNTGVAFIAGL* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1539 375 PANTHER PECTINESTERASE 1 373 - -
Mal3g1539 375 Pfam Pectinesterase 62 361 IPR000070 GO:0030599|GO:0042545
Mal3g1539 375 ProSitePatterns Pectinesterase signature 2. 206 215 IPR033131 -
Mal3g1539 375 ProSitePatterns Pectinesterase signature 1. 87 106 IPR018040 -
Mal3g1539 375 Gene3D - 56 375 IPR012334 -
Mal3g1539 375 PANTHER PECTINESTERASE 1 373 - -
Mal3g1539 375 SUPERFAMILY Pectin lyase-like 59 374 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1539 Mal-Chr3 66533311 66534523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1539 1 371 Carbohydrate Esterase AT1G11580 67.112 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1539 K01051 - gmx:100815836 644.81