Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1514 ATGCCAAGAAAGTTTGTGGAGAAATATGGGAATGGTCTACCAAAAGCTACATGTCTAAAGACTCCAAATGGTGGAAAATGGAAATTAAATTTGCTAAAAAGTGATGGCAAGATATGGTTTAAAAAGGGTTGGAAAGAATTTGCAAAGCATCACTCTCTAGCTCATGGCCATCTTCTGCTTTTTAGATATGAAAAAACTTCACATTTTGAGGTAAATATTTTTGAAAAGAGTGCCTTGGAGACAAACTACCCTTTCAAAAGAGTTGAAGCTAAAAGGGTCTCTAATGATCAAGGAAATAAATCTCCAAATGATGAAAATTGTAGAAGATCTCAAAGGAGAAAAACTAGCTCTGCCTTTGAATTTCATCAAGAATGTGAAATTGGAAGCCTTAGCTGTGTTGAAGTTGGGAAATCACAAAAGGTAGCTGTGCATCATATTAACAGAAAGTCCAAAGGAAAACAAGTGATTACTACTGCTGAGAAAGTTACAACTCTCGAAAGAGCAGAGTCTTTTAAAATCTGTAATCCATCCTTTGTTGTTGTCATGGCTGCATCCTACGTTGAACACCATTTCCTTTTGAATATACCATGCTTGTTTGGTAAGGCACACTTTGATGTGAATAAGAAGAGAGGAGATATTTATCTTCAGATGTTGAATGGGAGAGTTTCGCCTGCAAGGTACTCTGTCAGGACGGCCGGCAGTGGACTAAGATTTGAACTCATAAGTGGATGGAAGGATTTTGTAAAGGACAATAACCTGAAAGTTGGTGATGTTTGCAAATTTGAGCTCATTTCTAGTACTATAATTACCTTCATTGTTCACATCTTTAGAGCGACAGACAATGACAACACAAATTGTTCAACATCTCAAAGTAGGATTAATTGTATGTTTAATTTTTTCATTTCATCTTATTTACTTTTTCTCAATTGA 930 0.357 MPRKFVEKYGNGLPKATCLKTPNGGKWKLNLLKSDGKIWFKKGWKEFAKHHSLAHGHLLLFRYEKTSHFEVNIFEKSALETNYPFKRVEAKRVSNDQGNKSPNDENCRRSQRRKTSSAFEFHQECEIGSLSCVEVGKSQKVAVHHINRKSKGKQVITTAEKVTTLERAESFKICNPSFVVVMAASYVEHHFLLNIPCLFGKAHFDVNKKRGDIYLQMLNGRVSPARYSVRTAGSGLRFELISGWKDFVKDNNLKVGDVCKFELISSTIITFIVHIFRATDNDNTNCSTSQSRINCMFNFFISSYLLFLN* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1514 309 SMART B3_2 2 77 IPR003340 GO:0003677
Mal3g1514 309 SMART B3_2 178 279 IPR003340 GO:0003677
Mal3g1514 309 ProSiteProfiles B3 DNA-binding domain profile. 178 279 IPR003340 GO:0003677
Mal3g1514 309 Gene3D - 1 78 IPR015300 -
Mal3g1514 309 Pfam B3 DNA binding domain 2 76 IPR003340 GO:0003677
Mal3g1514 309 Pfam B3 DNA binding domain 178 278 IPR003340 GO:0003677
Mal3g1514 309 Gene3D - 155 281 IPR015300 -
Mal3g1514 309 PANTHER B3 DOMAIN-CONTAINING 1 278 - -
Mal3g1514 309 SUPERFAMILY DNA-binding pseudobarrel domain 1 84 IPR015300 -
Mal3g1514 309 MobiDBLite consensus disorder prediction 91 112 - -
Mal3g1514 309 CDD B3_DNA 176 277 IPR003340 GO:0003677
Mal3g1514 309 ProSiteProfiles B3 DNA-binding domain profile. 1 77 IPR003340 GO:0003677
Mal3g1514 309 CDD B3_DNA 1 74 IPR003340 GO:0003677
Mal3g1514 309 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 1 278 - -
Mal3g1514 309 SUPERFAMILY DNA-binding pseudobarrel domain 175 280 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1514 Mal-Chr3 65889111 65890875 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1514 1 280 B3 DNA Binding Superfamily AT3G18990 28.049 4.75e-31 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1514 B3 2.5e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1514 - - mtr:MTR_7g050580 432.18