Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1513 ATGGGCTGGCCCGACCTGTTTGCTCAATTTGGCCCGGTTGGCTATGGCAAGTCGAGCTGGACGGTGATCCCAAGAAAGTTTGTGGAGAAATATGGAGAAGGCTTACCAGAAGCTATATGCCTAAAGACTCCAAATGGTGGGAATTGGGAATTAAATTTGCTAAAAAATGATGGAAAAATATGGTTTCAAAAAGGTTGGAAAGAATTTGCAGATTTTCATTCTCTAGCTGATGGCCATCTTCTAGTTTTCAGATATGAAAGAACCTCCCATTTTAAGGTTAAAATCTTTGATAAGAGTGCCTTAGAGATAAACTACCCTTTCAAAAGAGTCGAAGCTAAGAGGGTCTCCTCCAATGGTCAAGGAAATAAACCTCCAAATGGTGAAAATTATAGATCATCTCAAAAAAGAAAAGCTAATCCATCCTCTGAATTTCTTCAATCATGTGAATTTGGAAGCAGTAGTGGTATTAAATCTGGGAAATCACAAAAGTTAGATGTGGATCATACTCACAAAAAGTGCAAAGGGAAACAAGTGATTACTACTGCCAAGAAAGTTACATCTCTTGAAAGAGCAAAATCTTTCAAAACCTGTAATCCATCCTTTATTGTAGTCATGGGTGCATCATACGTTGGATGCAATTTTGCTCTGACTATACCATCCATGTTTGGTAAGACACACTTTGATTTAAATAAGGATCGAGGAGATATTGATTTTGTGTTAAATGGGAGAGTTTGGTCTGCAAGGTACCTAATTAGGATGACCCCTACAGGACTAAGATTTGAACTCTCAAGTGGATGGAAAGCATTTGCAATGGACAACAATTTAAAAGTTGGTGATGTTTGCAACTTTGAGCAAATTATTAGTACTAATATGACCTTCCAAGTTCGCATCTTTAGAGACACAGACAAAGAATCTCAAAGTAGGATTAATTGA 933 0.3751 MGWPDLFAQFGPVGYGKSSWTVIPRKFVEKYGEGLPEAICLKTPNGGNWELNLLKNDGKIWFQKGWKEFADFHSLADGHLLVFRYERTSHFKVKIFDKSALEINYPFKRVEAKRVSSNGQGNKPPNGENYRSSQKRKANPSSEFLQSCEFGSSSGIKSGKSQKLDVDHTHKKCKGKQVITTAKKVTSLERAKSFKTCNPSFIVVMGASYVGCNFALTIPSMFGKTHFDLNKDRGDIDFVLNGRVWSARYLIRMTPTGLRFELSSGWKAFAMDNNLKVGDVCNFEQIISTNMTFQVRIFRDTDKESQSRIN* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1513 310 Gene3D - 178 303 IPR015300 -
Mal3g1513 310 Gene3D - 12 100 IPR015300 -
Mal3g1513 310 CDD B3_DNA 199 299 IPR003340 GO:0003677
Mal3g1513 310 ProSiteProfiles B3 DNA-binding domain profile. 201 301 IPR003340 GO:0003677
Mal3g1513 310 PANTHER B3 DOMAIN-CONTAINING 22 300 - -
Mal3g1513 310 MobiDBLite consensus disorder prediction 114 142 - -
Mal3g1513 310 SUPERFAMILY DNA-binding pseudobarrel domain 197 300 IPR015300 -
Mal3g1513 310 CDD B3_DNA 15 97 IPR003340 GO:0003677
Mal3g1513 310 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 22 300 - -
Mal3g1513 310 SMART B3_2 201 301 IPR003340 GO:0003677
Mal3g1513 310 SMART B3_2 7 99 IPR003340 GO:0003677
Mal3g1513 310 MobiDBLite consensus disorder prediction 115 142 - -
Mal3g1513 310 ProSiteProfiles B3 DNA-binding domain profile. 6 99 IPR003340 GO:0003677
Mal3g1513 310 SUPERFAMILY DNA-binding pseudobarrel domain 16 106 IPR015300 -
Mal3g1513 310 Pfam B3 DNA binding domain 12 98 IPR003340 GO:0003677
Mal3g1513 310 Pfam B3 DNA binding domain 201 299 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1513 Mal-Chr3 65821773 65823801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1513 23 302 B3 DNA Binding Superfamily AT3G18990 31.173 1.00e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1513 B3 2e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1513 - - mtr:MTR_7g050580 349.747