Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1512 ATGGCTAGTGAAATTCCTCATGTGAAGCCAATCCACTTTTTCAAGATCATACTTACTCAAAGCCTTCATGAAGGAAAGCTTATGATTCCAAGAAAGTTTGTGAAGAAATACAGAGAAGGTTTACCAAATGTTACAAGTCTAAAGACTCCAAATGGTGAAAAGTGGAAATTAAATTTGGTAAAAAGTGATGATGGCAAGATATGGTTTGAAAAGGGTTGGAAAGAATTTGCAGATTATCATTCTCTATCTCACGGCCATCTTCTGCTTTTCAAATATCAAAGAAATTCTCATTTTCTTGTGTACATCTTTGAAAAGAATGCCTTGGAGATAAATTACCCTTTCACAAGAGTTGAAGCTAATAGGGTCTCCAATGATCAAAGATATAAATCTCCAAATAATGAAGATTGTAGATCAAGTCAAAAGAGAAAAGTTAACTCCTCATTTGAATTTCATCAACCACGTGAAACTGGAAGCAATAGTTGTGTTAAAGTTGGGCAATATCAAAAGGTAGATGTGCATCATACTCACAAAAAGTGCAAAGGGAGAGAAGTGATTGCTACTGAGAAAGTTGCAACTCTTGACAGAGCAAACTCTTTCAAAACATGTAATCCATCATTTATTGTGTTCATGGGGGCATCATACGTTGAACGGCGTTTTCTTCTGAATATACCAGTTAAATTTTGTAAAACACACTTTGATTTGGAAAAGAAGAGAGGAGATATTTATTTTCAGGTGTTAAATGGAAGAGTTTGGCCTGCAAGGTACATAAACAGGAAGATCGTAACAGGACCAAAATTCGAACTCACAAGTGGATGGAAAGCATTTGCAAAAGACAATAACTTGAAAGTTCGTGATGTTTGCAAGTTTGAGCTCATATCTAGTACTATACTTACCTTCATTGTTCACATCTTTAGAGAGACTGACAACGACAGCACAAATTGTTCAACATCTCAAAAATCTTCCCAAATGAAATGTGAAGCTGCTCAAGGATAG 993 0.3545 MASEIPHVKPIHFFKIILTQSLHEGKLMIPRKFVKKYREGLPNVTSLKTPNGEKWKLNLVKSDDGKIWFEKGWKEFADYHSLSHGHLLLFKYQRNSHFLVYIFEKNALEINYPFTRVEANRVSNDQRYKSPNNEDCRSSQKRKVNSSFEFHQPRETGSNSCVKVGQYQKVDVHHTHKKCKGREVIATEKVATLDRANSFKTCNPSFIVFMGASYVERRFLLNIPVKFCKTHFDLEKKRGDIYFQVLNGRVWPARYINRKIVTGPKFELTSGWKAFAKDNNLKVRDVCKFELISSTILTFIVHIFRETDNDSTNCSTSQKSSQMKCEAAQG* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1512 330 CDD B3_DNA 12 103 IPR003340 GO:0003677
Mal3g1512 330 SUPERFAMILY DNA-binding pseudobarrel domain 9 106 IPR015300 -
Mal3g1512 330 MobiDBLite consensus disorder prediction 123 158 - -
Mal3g1512 330 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 7 306 - -
Mal3g1512 330 SMART B3_2 206 307 IPR003340 GO:0003677
Mal3g1512 330 SMART B3_2 13 106 IPR003340 GO:0003677
Mal3g1512 330 Gene3D - 6 107 IPR015300 -
Mal3g1512 330 MobiDBLite consensus disorder prediction 128 149 - -
Mal3g1512 330 ProSiteProfiles B3 DNA-binding domain profile. 12 106 IPR003340 GO:0003677
Mal3g1512 330 CDD B3_DNA 204 305 IPR003340 GO:0003677
Mal3g1512 330 PANTHER B3 DOMAIN-CONTAINING 7 306 - -
Mal3g1512 330 Gene3D - 184 309 IPR015300 -
Mal3g1512 330 ProSiteProfiles B3 DNA-binding domain profile. 206 307 IPR003340 GO:0003677
Mal3g1512 330 SUPERFAMILY DNA-binding pseudobarrel domain 199 306 IPR015300 -
Mal3g1512 330 Pfam B3 DNA binding domain 13 105 IPR003340 GO:0003677
Mal3g1512 330 Pfam B3 DNA binding domain 206 306 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1512 Mal-Chr3 65772290 65775014 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1512 13 325 B3 DNA Binding Superfamily AT3G18990 27.577 1.72e-34 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1512 B3 1.2e-19 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1512 - - mtr:MTR_7g050580 439.499