Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1511 ATGCCAAGAAAGTTTGTGGAGAAATATGGGAAAGGTCTACCAAAAGCTACATGTCTAAAGACTCCAAATGGTGGAAAATGGAAATTAGATTTGGTAAAAAGTGATGGCAAAACATGGTTCGAAAAGGGTTGGAAAGAATTTGCAGAGTATCATTCTCTATCTCAAGGCCATCTTTTGCTTTTCAAATATGAAAGAACTTCCCATTTTCATGTGCACATCTTTGAAAAGAGTGCCTTAGAGATAAAATACCCTTTCAAAAGAGTTGAAGCTAAAAGGGTCTCCAATGGTCAAGGAATTAAACCTACAAATAATGAAGATTGTAGAGCAAGTCAAAAGAGAAAAACTAACTCCACCTTTGAATTTGGAAGTAGTAGTTGTGTTAAAGTTGGAAAATCACAAAAGGTACCTGTGCATCTTATTGACAGAAAGTGCAAAGGGAAACAAGTGATTACTACTGAGAAAGTTAGAACTCTTGAAAGAGCAAAATCTTTCAAAACTTGTAATCCATCCTTTGTTGTTGTAATGGCAGCATCGTATGCTGAACACCGCTTTCTTTTGACTATACCGTCTATGTTTGGTATGGAGCACTTCAATTTGGAAAAGAAGAGAGGAGATATTTATTTTCAGGTGTTAATTAATGGAAGAGTTTGGCCTGCAAGGTACGCAATTAGGACTCGGAGAATAACACAACTAAAATTTGAACTCACAAGTGGATGGAAGGCATTTGCAAAGGACAATAACTTGAAAGTTGGTGATGTTTGCAACTTTGAGCTCATCTCTAGCACTATACTTTCCTTCATTGTTCGCATCTTTAGAGAGACAAACAATGACAACACAAATTGTTCAACATCTCAAAGTATGATTTAG 867 0.361 MPRKFVEKYGKGLPKATCLKTPNGGKWKLDLVKSDGKTWFEKGWKEFAEYHSLSQGHLLLFKYERTSHFHVHIFEKSALEIKYPFKRVEAKRVSNGQGIKPTNNEDCRASQKRKTNSTFEFGSSSCVKVGKSQKVPVHLIDRKCKGKQVITTEKVRTLERAKSFKTCNPSFVVVMAASYAEHRFLLTIPSMFGMEHFNLEKKRGDIYFQVLINGRVWPARYAIRTRRITQLKFELTSGWKAFAKDNNLKVGDVCNFELISSTILSFIVRIFRETNNDNTNCSTSQSMI* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1511 288 SUPERFAMILY DNA-binding pseudobarrel domain 167 273 IPR015300 -
Mal3g1511 288 ProSiteProfiles B3 DNA-binding domain profile. 1 77 IPR003340 GO:0003677
Mal3g1511 288 CDD B3_DNA 1 74 IPR003340 GO:0003677
Mal3g1511 288 Gene3D - 1 78 IPR015300 -
Mal3g1511 288 PANTHER B3 DOMAIN-CONTAINING 1 273 - -
Mal3g1511 288 SUPERFAMILY DNA-binding pseudobarrel domain 1 84 IPR015300 -
Mal3g1511 288 Pfam B3 DNA binding domain 171 273 IPR003340 GO:0003677
Mal3g1511 288 Pfam B3 DNA binding domain 2 76 IPR003340 GO:0003677
Mal3g1511 288 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 1 273 - -
Mal3g1511 288 CDD B3_DNA 169 272 IPR003340 GO:0003677
Mal3g1511 288 SMART B3_2 171 274 IPR003340 GO:0003677
Mal3g1511 288 SMART B3_2 2 77 IPR003340 GO:0003677
Mal3g1511 288 ProSiteProfiles B3 DNA-binding domain profile. 171 274 IPR003340 GO:0003677
Mal3g1511 288 Gene3D - 148 276 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1511 Mal-Chr3 65757173 65758777 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1511 1 272 B3 DNA Binding Superfamily AT3G18990 27.692 1.04e-23 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1511 B3 1.2e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1511 - - mtr:MTR_7g050580 415.616