Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1510 ATGATTCCAAGAAAGTTTGTGGAGAAATATGGAGCTGGTTTATCAAAAGCTATTTATCTAAAGACTTCAAATGGTGCAAAGTGGAAATTAGATTTGGTAAAAAGTGATGGCAAAATATGGTTTGAAAAGGGTTGGAAAGAATTTGCAGAGTATCATTCTCTAGCTCATGGCCATCTTCTTCTTTTCAAATATCAAAGAAATTCTCATTTTCATGTGCACATCTTTGAAAAGAATGCCTTAGAGATAAAATACCCTTTCAAAAGAGTTGAAGCTAAAAGGGTCTCCAATGGTCAAGGAAATAAACCTACAAAGAATGAAGATTGTAGAGCAAGTCAAAAGAGAAAAGCTAACTCCTCCTTTGGATTTGGAAGTAAGGGTTGTGTTAAAGTTGGGAAATCACAAAAGGTAGCTGTGCATCTTATTGACAGAAAATGCAAAGGGAAACAAGTGATTACTGCTGAGAAAGTTAGAACTCTTGAAAGAGCAAAATCTTTCAAAGCTTGTAATCCATCCTTTGTTGTTGTCATGGGAGCATCTTACGTTGAACACCACTTTCATATGACTATACCGTCAATGTTTGGTAATAGACACTTTGATTTGGAAAAGAAGAGAGGAGATATTTATATTCAGGTGTTAAATGGAAGAGTTTGGCCTGCAAGGTACGCAATTAGGATGCGCAGAACAGGACCAAAATTTGAACTCACAAATGGATGGAAGGCATTTGCAAAGGACAATAACTTGAAAGTTGGTGATGTTTGCAACTTTGAACTCATCTCTAGCACTACACTTTCCTTCATTGTTCACATCTTTAGAGAGACAGACAATGACACCACAAATTGTTCAACATCTCAAAGTATGATTAGTTGA 867 0.3599 MIPRKFVEKYGAGLSKAIYLKTSNGAKWKLDLVKSDGKIWFEKGWKEFAEYHSLAHGHLLLFKYQRNSHFHVHIFEKNALEIKYPFKRVEAKRVSNGQGNKPTKNEDCRASQKRKANSSFGFGSKGCVKVGKSQKVAVHLIDRKCKGKQVITAEKVRTLERAKSFKACNPSFVVVMGASYVEHHFHMTIPSMFGNRHFDLEKKRGDIYIQVLNGRVWPARYAIRMRRTGPKFELTNGWKAFAKDNNLKVGDVCNFELISSTTLSFIVHIFRETDNDTTNCSTSQSMIS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1510 288 MobiDBLite consensus disorder prediction 93 112 - -
Mal3g1510 288 PANTHER B3 DOMAIN-CONTAINING 1 272 - -
Mal3g1510 288 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 1 272 - -
Mal3g1510 288 SMART B3_2 172 273 IPR003340 GO:0003677
Mal3g1510 288 SMART B3_2 1 78 IPR003340 GO:0003677
Mal3g1510 288 Gene3D - 1 79 IPR015300 -
Mal3g1510 288 Pfam B3 DNA binding domain 1 78 IPR003340 GO:0003677
Mal3g1510 288 Pfam B3 DNA binding domain 172 272 IPR003340 GO:0003677
Mal3g1510 288 CDD B3_DNA 1 75 IPR003340 GO:0003677
Mal3g1510 288 SUPERFAMILY DNA-binding pseudobarrel domain 169 274 IPR015300 -
Mal3g1510 288 SUPERFAMILY DNA-binding pseudobarrel domain 1 78 IPR015300 -
Mal3g1510 288 CDD B3_DNA 170 271 IPR003340 GO:0003677
Mal3g1510 288 ProSiteProfiles B3 DNA-binding domain profile. 1 78 IPR003340 GO:0003677
Mal3g1510 288 ProSiteProfiles B3 DNA-binding domain profile. 172 273 IPR003340 GO:0003677
Mal3g1510 288 Gene3D - 149 275 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1510 Mal-Chr3 65745701 65747780 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1510 2 274 B3 DNA Binding Superfamily AT3G18990 26.074 1.32e-21 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1510 B3 3.2e-20 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1510 - - mtr:MTR_7g050580 412.149