Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1506 ATGTTCACTCATGGACCAAGATTTGAACTCACAAGAGGATGGAAGGAATTTGCAATGGACAATAACTTGAAAGTTGGTGATGTTTGCAAGTTTGAACTCATCTCTTGCACTAGTACTATACTTGCCTTCCATGTTCACATCTTTAGAGAGACAAACAATGACAACACAAATTGTTCAACATCTCAAATATCTTTCCAAATGAAAGAAGAAGCTACTCAAGGATGA 225 0.3644 MFTHGPRFELTRGWKEFAMDNNLKVGDVCKFELISCTSTILAFHVHIFRETNNDNTNCSTSQISFQMKEEATQG* 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1506 74 ProSiteProfiles B3 DNA-binding domain profile. 1 51 IPR003340 GO:0003677
Mal3g1506 74 SUPERFAMILY DNA-binding pseudobarrel domain 5 50 IPR015300 -
Mal3g1506 74 CDD B3_DNA 6 49 IPR003340 GO:0003677
Mal3g1506 74 Pfam B3 DNA binding domain 7 49 IPR003340 GO:0003677
Mal3g1506 74 Gene3D - 1 53 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1506 Mal-Chr3 65627458 65627760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1506 10 57 REM Transcription Factor Family AT4G33280 43.750 1.10e-08 47.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1506 B3 1.9e-09 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1506 - - mtr:MTR_7g050580 103.99