Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1505 ATGGCTAGTGAAACTAGTGAGGTGAAGCCAATCCACTTTTTCAAGATCATAATTACTCAAAATCTTGATGAAGGAAAGCTGATGATTCCAAGAAAGTTTGTGGAGAAATATGGAGAAGGTTTATCAAAATCTATATATCTAAAGACTACAAATGGTGCAAAGTGGAAATTAGATTTGGTAAAAAGTGATGATGGCAAAATATGGTTTGAAAAGGGTTGGAAAGAATTTGCAGAGTATCATTCTCTAACTCAAGGCCATCTTCTGCTTTTCAAATATAAAAGAAATTCTCATTTTCTTGTGTGCATCTTTGAAAAGAATGCCTTAGAGATAAAATACCCTTCCAAAAGAGGGGAAGCTAAAAGGGACTCCAATGGTCAAGGAAATAAACCTCCAAATAATGAAGATTGTAGAGCAAGTCAAAAGAGAAAAGCTAACTCCTCCTTTGAATTTCATCAACCAAGTGAAATTGGAAGCAGTAGTCGTGTTAAAGTTGGAAAATTGCAAAAGGTAGCAACTATGCAACATACTGAGAGACAGTCCAAAGGGAAACAAGTTATTACTGCTAACAAAGTTACAACTCTTGAAAGGGCAAAATCTTTCAAAACATGTAATCCGTCCTTTGTTGTTGTCATGCGTGCATCATGCGTTGAACCAAAATTTGCTCTGAAAATTCCATTCCGACCCAGCTCAAATGGAGGATCCTAA 705 0.3603 MASETSEVKPIHFFKIIITQNLDEGKLMIPRKFVEKYGEGLSKSIYLKTTNGAKWKLDLVKSDDGKIWFEKGWKEFAEYHSLTQGHLLLFKYKRNSHFLVCIFEKNALEIKYPSKRGEAKRDSNGQGNKPPNNEDCRASQKRKANSSFEFHQPSEIGSSSRVKVGKLQKVATMQHTERQSKGKQVITANKVTTLERAKSFKTCNPSFVVVMRASCVEPKFALKIPFRPSSNGGS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1505 234 CDD B3_DNA 12 103 IPR003340 GO:0003677
Mal3g1505 234 PANTHER B3 DOMAIN-CONTAINING 3 225 - -
Mal3g1505 234 Pfam B3 DNA binding domain 13 105 IPR003340 GO:0003677
Mal3g1505 234 ProSiteProfiles B3 DNA-binding domain profile. 12 106 IPR003340 GO:0003677
Mal3g1505 234 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 3 225 - -
Mal3g1505 234 MobiDBLite consensus disorder prediction 115 160 - -
Mal3g1505 234 Gene3D - 5 107 IPR015300 -
Mal3g1505 234 SMART B3_2 13 106 IPR003340 GO:0003677
Mal3g1505 234 MobiDBLite consensus disorder prediction 145 160 - -
Mal3g1505 234 SUPERFAMILY DNA-binding pseudobarrel domain 7 106 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1505 Mal-Chr3 65617511 65621339 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1505 13 113 B3 DNA Binding Superfamily AT4G01580 43.564 3.42e-22 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Mal3g1505 B3 4.2e-17 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1505 - - mtr:MTR_7g050580 279.641