Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1484 ATGTTGATTACTTCAAAATCAAAAGGGCCATGGAACGATGAGGAGGACAAGATATTGATTGAAGCTCATAAGAAAGTTGGGAACAAGTGGGCAGAAATTTCAAAGAGATTGCCAGGGCGTACTGAGAACTCTATCAAGAACCATTGGAATACTACTAAGAGGAGTCTGAATGTCAAGATGAAGCGAATTAGGAGCAGTGATGGTTCAAAGGGAAAGCTTCTTCAAAACTATATTAGGGAAGTCATTAGTTTTGAAGAAGGTCAAAAGAAAATGATGGATAATGGGAATGAGGATGGCAACAATGATTTCAATTATGGAAATTGGAAAACTCAAGAGGATGAAGTTGGTGGTTACCTTCCATTTGATTTTTATGAAAATGAAATGGAGAGTGGATTTGGCCTAATGGATTATGAGGTTGGAATCTAG 426 0.3756 MLITSKSKGPWNDEEDKILIEAHKKVGNKWAEISKRLPGRTENSIKNHWNTTKRSLNVKMKRIRSSDGSKGKLLQNYIREVISFEEGQKKMMDNGNEDGNNDFNYGNWKTQEDEVGGYLPFDFYENEMESGFGLMDYEVGI* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1484 141 SUPERFAMILY Homeodomain-like 6 57 IPR009057 -
Mal3g1484 141 Gene3D - 10 79 - -
Mal3g1484 141 ProSiteProfiles Myb-like domain profile. 3 53 IPR001005 -
Mal3g1484 141 PANTHER TRANSCRIPTION FACTOR MYB98 8 79 - -
Mal3g1484 141 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 57 IPR017930 -
Mal3g1484 141 CDD SANT 10 53 IPR001005 -
Mal3g1484 141 PANTHER MYB PROTEIN-RELATED 8 79 - -
Mal3g1484 141 SMART sant 7 55 IPR001005 -
Mal3g1484 141 Pfam Myb-like DNA-binding domain 8 51 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1484 Mal-Chr3 65003551 65004054 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1484 8 81 MYB Transcription Factor Family AT4G18770 59.459 1.53e-22 90.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g1484 Myb_DNA-binding 5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1484 K09422 - mtr:MTR_4g088015 115.161