Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1469 ATGACTAATTTGAGAAAAGAAAAAGGGATGAGTCAACATGAAGTGGGTCAGTACGAGAGTTCCTCATCTTTGGGGAAACTTTATGATATCCCACAGGAAGCACTGGAAAATTTAGAATGGTACACTACTTTTTGGGATGACATGGAGAAATTAGAAAAGGTCAAGAATCCATCTTCTAATGTGTCAAATGTTGATGTAAATCAGCAGGGCAATAATGAAACAAGTTTGCCTAATCATCAAAGCATAGATAATCAAGAAAATCCATCTTCTAATGTGTCAAATGTTGAAATAAATCAACAGGGAAGTATTGAAACAAGTTTGCCTAATCATGAGAAGAAGGGTAGAACTAAGACACTCGAAGCAATGGAGAGAAGTTGCAGCCATTGTGAGACCAAACATACTACGCAATGGAGGTTGGGTCCTTTGGGGAGAAATACTTTATGCAATGCATGTGGGTTGCGATTCAAGTCAAATCGATTGGTACAAGGGTATAGACCTATGGCAAGTCCACTCGAAACAAAGATAATATACTCCTCAATCGAGAGAAGTTGCAGCCATTGTGAGACTAAACATACTACTCAATGGAGGTTGGGTCCTTTGGGGAGAAATACTTTATGCAATGCATGTGGATTGCGATACAAGTCAAATCGTTTGATTCAAGGGTATAGACTTAAGGCAAGGTCCTAA 687 0.3886 MTNLRKEKGMSQHEVGQYESSSSLGKLYDIPQEALENLEWYTTFWDDMEKLEKVKNPSSNVSNVDVNQQGNNETSLPNHQSIDNQENPSSNVSNVEINQQGSIETSLPNHEKKGRTKTLEAMERSCSHCETKHTTQWRLGPLGRNTLCNACGLRFKSNRLVQGYRPMASPLETKIIYSSIERSCSHCETKHTTQWRLGPLGRNTLCNACGLRYKSNRLIQGYRLKARS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1469 228 ProSitePatterns GATA-type zinc finger domain. 184 209 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 122 162 - -
Mal3g1469 228 ProSitePatterns GATA-type zinc finger domain. 126 151 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 ProSiteProfiles GATA-type zinc finger domain profile. 120 158 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 SMART GATA_3 178 228 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 SMART GATA_3 120 176 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 Pfam GATA zinc finger 126 160 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 Pfam GATA zinc finger 184 217 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 MobiDBLite consensus disorder prediction 56 93 - -
Mal3g1469 228 PANTHER GATA TRANSCRIPTION FACTOR 180 226 - -
Mal3g1469 228 PANTHER GATA TRANSCRIPTION FACTOR 1 170 - -
Mal3g1469 228 Gene3D - 116 176 IPR013088 GO:0006355|GO:0008270
Mal3g1469 228 CDD ZnF_GATA 183 217 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 CDD ZnF_GATA 125 170 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 ProSiteProfiles GATA-type zinc finger domain profile. 178 228 IPR000679 GO:0006355|GO:0043565
Mal3g1469 228 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g1469 228 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 180 220 - -
Mal3g1469 228 Gene3D - 178 223 IPR013088 GO:0006355|GO:0008270
Mal3g1469 228 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 180 226 - -
Mal3g1469 228 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1469 Mal-Chr3 64460694 64462031 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1469 180 223 C2C2-Gata Transcription Factor Family AT4G36240 61.364 8.47e-15 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal3g1469 GATA 7e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1469 - - mtr:MTR_7g446070 188.734