Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1468 ATGCCTAAAACTCCAGTCTCTTCCACCAAGGGCCCACAACCATTTCAAATCTCCAACAAGAACGTTACTGAAAGAGCAATATTGTGCAAAAATGTCAACACAAGAAGAATATTGCCAAAGGCTCAAAGAACCACTGAACCCAAGGAAACACCATTCAAAATCTTGGAACAGAACAATATATCCAAGAAACGTCGTTATGAAAATGTAACTTCAGGTAACAAAAACAACAAAGAGAATGAGAAGAAAGAAAGCATTAGTGATGATTCCGATGACTCAAGACGAAAGAAAGTAAAGAGAACATTAGATAGTTTCCGTGCTCTCTGTGGAAACCTTGATAAGAAATTTAAGGGCGACGCGCTTCCTATCGAAGTGTCAAGAATTCTTAAACATCGTGGCAAGTTCATTGACGACGGAAAAGAAACTGTTGGAAAAGTCTCTGGAATTGAAGTAGGTGATGAGTTTCAGTATTGGGAACAACTCAATGTTGTTGGTCTCCATCGTCAGAATCTTAGTGGCATTGATTACGTGATAAAGAATGGGAAAATGGTTGCAACTAGCGTTGTTACTTCTTGTTTTTCTGATAAGGATGATACAAAAGTGTTTGTTTATACAGGGGAAGGAGGTAATGGGAATCTTGCTTTGAAGAATAGTTTTGATGTTAAGAATCCTATTAGAGTTATAATTAAGTTTAATTCGAAGAAAGGTGGCGCTGCGATGTTTTGTTACTATGGTCTTTATAAAGTTGAATCGTTTCAGAAAAAGATTGGGAAATCAGGTTATAAATTTTGTTTGGTTAGATTACCTAATCAAAAAGAGGTTTCTTGCAATGAGTTGAGGGAATGTGAGAAAAATTATGAAACAAAAAAATGTCTATTTTTTGTTGAAGATATTTCCAGGGGTAAAGAGGTTATTCCTATACGTGTGGTTAATCGTATAGATAATGAAAGGCTTCCATTTTTTCAATACATTACTGATATGATGTATCCTAAATGGTGTGAAATTTTTAAAGATTCCTCTGCTGGGCGTAAATGTGTTGGTGAATGTTTTGATTCGTTGAAATGTGTTCGTGCTCGAGAGAATGGAGGAAAATTTCCTTTTCATGATTGTAAGTGTTCTTCTCGTTGTTATCATAGAGTCCATAAAAATGGGATTAAATTTAAGCTTGAAATTTTCAAGACTAAGGCAAAAGGGTGGGGTGTAAGATCATATAATGCAATTCCTTCTGGAAGTTTTGTTTGTGAATATTTAGGTAACATTATTGAAGATGTCGAAGCTTTGAAAATGGTTGATAATGAGTACTTATTTAATATTAATCACAAGGATGATAGTTTGTGGGAAGAGGATTCATATTCTGCTTCAAGTAGTGACAGTGGCAGTTTAACCATTGATGCTTCTTATTATGGTAATGTTGCGAGATTCATCAACCACAGTTGCTCTCCGAATTTGTTTGCTAAAAATGTTGTTTATGATCATGATGATACAAGGATTCCACACATCATGCTATTTGCTGCTGAGGACATTCCGACGATGAACGAGCTGACCTACAATTACAATTACAAGATAGATCAAGTGATTGATTCCAATGGAAATGTAAAGAAGAAAAAGTGTTATTGTGCAGCTTCTGACTGCATTGGTAGATTGTATTAA 1647 0.3528 MPKTPVSSTKGPQPFQISNKNVTERAILCKNVNTRRILPKAQRTTEPKETPFKILEQNNISKKRRYENVTSGNKNNKENEKKESISDDSDDSRRKKVKRTLDSFRALCGNLDKKFKGDALPIEVSRILKHRGKFIDDGKETVGKVSGIEVGDEFQYWEQLNVVGLHRQNLSGIDYVIKNGKMVATSVVTSCFSDKDDTKVFVYTGEGGNGNLALKNSFDVKNPIRVIIKFNSKKGGAAMFCYYGLYKVESFQKKIGKSGYKFCLVRLPNQKEVSCNELRECEKNYETKKCLFFVEDISRGKEVIPIRVVNRIDNERLPFFQYITDMMYPKWCEIFKDSSAGRKCVGECFDSLKCVRARENGGKFPFHDCKCSSRCYHRVHKNGIKFKLEIFKTKAKGWGVRSYNAIPSGSFVCEYLGNIIEDVEALKMVDNEYLFNINHKDDSLWEEDSYSASSSDSGSLTIDASYYGNVARFINHSCSPNLFAKNVVYDHDDTRIPHIMLFAAEDIPTMNELTYNYNYKIDQVIDSNGNVKKKKCYCAASDCIGRLY* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1468 548 MobiDBLite consensus disorder prediction 39 94 - -
Mal3g1468 548 Pfam SET domain 397 518 IPR001214 GO:0005515
Mal3g1468 548 SMART G9a_1 138 270 IPR003105 -
Mal3g1468 548 ProSiteProfiles SET domain profile. 386 518 IPR001214 GO:0005515
Mal3g1468 548 SMART set_7 386 524 IPR001214 GO:0005515
Mal3g1468 548 ProSiteProfiles YDG domain profile. 143 269 IPR003105 -
Mal3g1468 548 ProSiteProfiles Post-SET domain profile. 532 548 IPR003616 -
Mal3g1468 548 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 13 546 - -
Mal3g1468 548 SMART preset_2 294 376 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Mal3g1468 548 SUPERFAMILY PUA domain-like 128 274 IPR015947 -
Mal3g1468 548 Gene3D SET domain 285 548 IPR046341 -
Mal3g1468 548 Gene3D - 141 278 IPR036987 -
Mal3g1468 548 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 13 546 - -
Mal3g1468 548 MobiDBLite consensus disorder prediction 58 94 - -
Mal3g1468 548 Pfam SAD/SRA domain 142 270 IPR003105 -
Mal3g1468 548 SUPERFAMILY SET domain 284 524 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1468 Mal-Chr3 64450158 64451804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1468 131 548 EF-hand Containing Proteins AT5G13960 34.765 4.49e-76 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal3g1468 SAD_SRA 1.8e-27 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1468 K11420 - mtr:MTR_7g445710 601.668