Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1467 ATGGACGGAGGGGGATTTGACAGACAAAATGCAAATTCAGAGGAACAATTTTACTATATTCCAAAGGAGGCACTACAAAATTTGGAATGGTACACTACTTTTTGGGATACCATGGAGAAAAGTTTGCACGAGGATTTGAATTATTTGCTTTTAGGTGACACTTGTGAGAAAGAAAAGGTCAAATTCAATCAATTGGGTGAAGGAAAAACACAATCTTTCGATGTATCAAATGTTCAAATAAATCAAGAGGACAATATTGATACATGTTTTTCTAATGATTTCATGTGGTCAAATATTGATGAGAGAGAGATTATCAATTTGGAGCAACCCAGTGAAGAAAAAATTCAAAAGGATCCTTTTTTGGATGTGTCAAATATTCATGCCATCAATCACAAATATCTACCAAAGGAGAAATTGGATACAAATCAGAATGAGAATATCAAAGTAGAGCAATATGGTAAAGGAAAAATTCAAGAAGATGTGTCAAATATTCATATCATCAATCATGAGTATGAGTATCAACCAAAGGAGAAATTGGATAAAGTTGAGAAAGAGAATATCAAAGTAGAGCAATATGGTAAAGGAAAAACTAGAAAGCATCTATCAAAGACTAAAGTGAAGTCATGTTCTATTAAGAAGAGTAGAGCTAAGAAACTCAAAGCAAAGAAAATAGATATATATAGAGATAGAAGTTGCAGCCATTGTGAGACCAAACACACAACTCAATGGAGGTTGGGTCCTTTGGGGAAAAATACTTTATGCAATGCATGTGGGTTGCGATACAAGTCAAATCGATTGGTTCAAGGGTATAGACCGGTGGCAAGTCCATCTTTTGATTTTAAAAAGCATTCAAATTTTCACAAGATCTTGTTGAAAAACGAAGGATAA 888 0.3378 MDGGGFDRQNANSEEQFYYIPKEALQNLEWYTTFWDTMEKSLHEDLNYLLLGDTCEKEKVKFNQLGEGKTQSFDVSNVQINQEDNIDTCFSNDFMWSNIDEREIINLEQPSEEKIQKDPFLDVSNIHAINHKYLPKEKLDTNQNENIKVEQYGKGKIQEDVSNIHIINHEYEYQPKEKLDKVEKENIKVEQYGKGKTRKHLSKTKVKSCSIKKSRAKKLKAKKIDIYRDRSCSHCETKHTTQWRLGPLGKNTLCNACGLRYKSNRLVQGYRPVASPSFDFKKHSNFHKILLKNEG* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1467 295 PANTHER GATA TRANSCRIPTION FACTOR 13 295 - -
Mal3g1467 295 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 226 282 - -
Mal3g1467 295 ProSiteProfiles GATA-type zinc finger domain profile. 226 264 IPR000679 GO:0006355|GO:0043565
Mal3g1467 295 Gene3D - 226 287 IPR013088 GO:0006355|GO:0008270
Mal3g1467 295 ProSitePatterns GATA-type zinc finger domain. 232 257 IPR000679 GO:0006355|GO:0043565
Mal3g1467 295 SMART GATA_3 228 280 IPR000679 GO:0006355|GO:0043565
Mal3g1467 295 CDD ZnF_GATA 231 282 IPR000679 GO:0006355|GO:0043565
Mal3g1467 295 Pfam GATA zinc finger 232 266 IPR000679 GO:0006355|GO:0043565
Mal3g1467 295 PANTHER GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 13 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1467 Mal-Chr3 64433223 64436109 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1467 210 292 C2C2-Gata Transcription Factor Family AT3G60530 48.810 2.13e-23 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal3g1467 GATA 4.1e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1467 - - mtr:MTR_7g446110 344.354