Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1460 ATGGAATACAGAAGGTTTGATAATAGTCAAGAAATTGAGGCTGAAAATGTTGAAGGAAGTCATGAAGTGGTAAACAATGGTGACATGGAAGAAGATGAGGATGGATTTGACTATGGTGGCATGGATTATGGAATTGATAATGAAGGGGCAGAATATGGTGACAATGAAGAAGATGATGAGGTTGAAATTGATGATGAGGATGAAGTATATCAAAATGGTGACATGGAAGAAGAGGATATTAATGATGAGGAAGAAGAGGATATTAATGATGAGGATGAAGTAGTTCAAAATGGTGACACGGAAGAAGGGGATGGAAATGAGGCTCAAGGAGTTCAAAATGATGACATGGAAGAAGATGGAAGTGGTTATGAAGGCCAATATGTTCTAGTTAATAGTGTTGAGGACATTGTGGCATTGGACCTGAGTGGTTTAGGGCCTTTATGTGCAAGGAAATTTGAATTTGGAGGCCTGGAAATTGCTTATCAGTTCTATATGTCGTATGGAAGAGCGAATGGATTTTCAGTCCGGAAAGGCAAGTTAATTTACTGCAAAACGGGAGAAGTAGTGCAACGCACATTTGTTTGCCATAGACAAGGATATAGGGAAGTCAGAGCACTAACTGAGGAGAATAGAAAACGTCCGGTAAAACGTGAGACTCGATGTGGATGTGACTATGAGGTTGCAGAATTTTCCAGGAAGTGGGCTGAAACTGTTGATAAATTTGGGTTGCATGACAACAATTGGATCAAAGAAACATATGAGAAGAGAAAGTCATGGGCAACAGCACATACTCGTGGCCACTTCTTTGCAGGATTCAGAACTACATCTCGATGTGAGGGGCTGTATGCAGAGTTAGGGAAGTTTGTTCACTCCCGTTACAACTTGTCAGATTTTTTGCTCCACTATCACCGTTGCCTAAATTTCATGCGGTTTAAAGAGGTACAAGAAGACTTTGATACTGAATATGGTGACCCAGTTCTCATTACCAAATTCACTAAACTTGAGCTATCTGGCGCGAAGGTATTTACGAAAGAAATCTTTTGTAAATACCAGACTTTCATCAACCGATCTGCTTCCATGGTTGTAACTGCAACGAAAGAAATATGTGGGCACTACATCTATACGATTAGGAGTAATTATACTGTGTTGCCTCAATGCCTTGTGATGAGTAGATGGACAAAAAATGCAAAGGATATATTAGGTAGAAGTTCAAATGGTCGTCCGAGATATTGGGACTCGCACCTTGCAACCAGATACGGAGCATTGATGTCTAGATGGGGAAGATTGTCTAAATTAGTCGTTGACAACGGTAATGACTACAAAGAGCATATGGACATGGCAGCTGCAGCTATTTTGAAAGCCGGACAAAAGAGAGGCATATGTGATGGCACGACAAACAATGTAGAGGAGGCCCCTGAGGAAGAAAATTTGCAAAATCCTGCTTCTGCTAGAACCAAAGGTAGAGGTGGTGGCATTGGCCCTTCTAGTGGAACAAACAATAGGCGTGTCACCCATTGTTCTACATGTGGTGCTTCTGGTCATAATAAGAAAACATGTCCTAAAAGAACGGTTGGTACTCAAGATGACAATAATATTGATGAAAATGTATGTTAA 1614 0.4064 MEYRRFDNSQEIEAENVEGSHEVVNNGDMEEDEDGFDYGGMDYGIDNEGAEYGDNEEDDEVEIDDEDEVYQNGDMEEEDINDEEEEDINDEDEVVQNGDTEEGDGNEAQGVQNDDMEEDGSGYEGQYVLVNSVEDIVALDLSGLGPLCARKFEFGGLEIAYQFYMSYGRANGFSVRKGKLIYCKTGEVVQRTFVCHRQGYREVRALTEENRKRPVKRETRCGCDYEVAEFSRKWAETVDKFGLHDNNWIKETYEKRKSWATAHTRGHFFAGFRTTSRCEGLYAELGKFVHSRYNLSDFLLHYHRCLNFMRFKEVQEDFDTEYGDPVLITKFTKLELSGAKVFTKEIFCKYQTFINRSASMVVTATKEICGHYIYTIRSNYTVLPQCLVMSRWTKNAKDILGRSSNGRPRYWDSHLATRYGALMSRWGRLSKLVVDNGNDYKEHMDMAAAAILKAGQKRGICDGTTNNVEEAPEEENLQNPASARTKGRGGGIGPSSGTNNRRVTHCSTCGASGHNKKTCPKRTVGTQDDNNIDENVC* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1460 537 MobiDBLite consensus disorder prediction 1 120 - -
Mal3g1460 537 MobiDBLite consensus disorder prediction 517 537 - -
Mal3g1460 537 MobiDBLite consensus disorder prediction 49 100 - -
Mal3g1460 537 Pfam FAR1 DNA-binding domain 162 225 IPR004330 -
Mal3g1460 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 125 223 IPR031052 GO:0006355
Mal3g1460 537 MobiDBLite consensus disorder prediction 468 500 - -
Mal3g1460 537 ProSiteProfiles Zinc finger CCHC-type profile. 506 521 IPR001878 GO:0003676|GO:0008270
Mal3g1460 537 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 228 352 - -
Mal3g1460 537 PANTHER PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 125 223 - -
Mal3g1460 537 MobiDBLite consensus disorder prediction 1 18 - -
Mal3g1460 537 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 228 352 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1460 Mal-Chr3 64342233 64344763 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal3g1460 FAR1 2.7e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1460 - - ccaj:109791041 201.445