Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1440 ATGGAAAATGATGCTAATGAAAACTTCTTTAGCACATCCTCATCAACATCATCAACACCAACATCTCCTAACTCAAATTCAAATTCAAGCACAAGTATTCATGACACCAAAAATAGCCCACAAAATGTAATGAAGAACAAGAAAAGAGAGAGAAATGAAAATGACACAAAACACCCTACTTATAGAGGGGTAAGAATGAGAGCATGGGGAAAATTTGTATCTGAAATCCGTGAGCCAAGAAAGAAATCAAGAATTTGGCTTGGAACATACCCTACAGCTGAAATGGCAGCTAGAGCTCATGATGTAGCTGCTTTAGCTATAAAGGGTCATTCAGCTTACCTCAATTTCCCTAATTTGGCTCAAAATCTTCCAAGGCCTTCAACTACATCACCTAAAGACATTCAAATTGCAGCTGCAAAAGCAGCAGCCACTGTCTATGTTGAGATTGAGAATTGCCAAGGTGAAAATGATCAACAACAAAGCCAAGAAGATCAAGATCAAGATCAAGTTTCATCTTCAACTCTTTCTTCCATAGATAATGTTCAAGAGTCTAATTCAAGTTCTCCATCTACTACTATTACAAATGATGATATTGATGACACACTCTTTGATCTGCCGGATCTTTTTCCTGATGGAAAAAATGGAATTCTTTCTTATTCTTCTTCTTGGCATTTATGTGCCATTGATAGTGGACTTCGTCTCGAGGAGCAATTTTCGTCGTCTTGGGAGTACTACTAG 738 0.3767 MENDANENFFSTSSSTSSTPTSPNSNSNSSTSIHDTKNSPQNVMKNKKRERNENDTKHPTYRGVRMRAWGKFVSEIREPRKKSRIWLGTYPTAEMAARAHDVAALAIKGHSAYLNFPNLAQNLPRPSTTSPKDIQIAAAKAAATVYVEIENCQGENDQQQSQEDQDQDQVSSSTLSSIDNVQESNSSSPSTTITNDDIDDTLFDLPDLFPDGKNGILSYSSSWHLCAIDSGLRLEEQFSSSWEYY* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1440 245 MobiDBLite consensus disorder prediction 1 40 - -
Mal3g1440 245 MobiDBLite consensus disorder prediction 1 62 - -
Mal3g1440 245 Gene3D AP2/ERF domain 60 118 IPR036955 GO:0003700|GO:0006355
Mal3g1440 245 CDD AP2 61 119 IPR001471 GO:0003700|GO:0006355
Mal3g1440 245 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 245 - -
Mal3g1440 245 SMART rav1_2 60 123 IPR001471 GO:0003700|GO:0006355
Mal3g1440 245 MobiDBLite consensus disorder prediction 155 196 - -
Mal3g1440 245 SUPERFAMILY DNA-binding domain 60 118 IPR016177 GO:0003677
Mal3g1440 245 PANTHER ETHYLENE RESPONSE FACTOR 9 245 - -
Mal3g1440 245 PRINTS Ethylene responsive element binding protein signature 61 72 IPR001471 GO:0003700|GO:0006355
Mal3g1440 245 PRINTS Ethylene responsive element binding protein signature 83 99 IPR001471 GO:0003700|GO:0006355
Mal3g1440 245 Pfam AP2 domain 59 110 IPR001471 GO:0003700|GO:0006355
Mal3g1440 245 MobiDBLite consensus disorder prediction 41 62 - -
Mal3g1440 245 ProSiteProfiles AP2/ERF domain profile. 60 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1440 Mal-Chr3 63398092 63398829 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1440 47 238 AP2-EREBP Transcription Factor Family AT2G44940 51.456 4.09e-63 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mal3g1440 AP2 4.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1440 - - gmx:100792964 247.669