Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1398 ATGAACAAAACAGTTAGCACTGTTTGTTTGGTCTTACTTCACATTTACCTGAGCATTGTGCTGACAATTTCAGCACCTCAAAGTGCCATTGTAACACAAGTTCCTGGTTTCAATGGAACAATACCCTCCAAGCATTATGCTGGGTATGTAACTGTGGATGAAAGCCATGGAAGGAACTTGTATTACTATTTTGTTGAGTCAGAAGGTAAACCTTCTGAGGATCCAGTGGTTCTTTGGCTTAATGGTGGACCTGGATGCTCTAGCATGGATGGATTCATATATGAGCATGGTCCTTTCAATTTTGAAGCAGCAAAGACAAAGGGAAGCTTGGAAACTCTGCACCTCAATCCATACAGCTGGACCAAGGTTTCGAGTATTATATATTTGGACTCTCCTGCTGGTGTTGGGTTTTCATACTCTGAGAATGAAAGTGATTACATAACCGGAGACATAAAGACTGCGTCTGATACACATGCCTTTCTCCTAAAGTGGTTTGAACTTTATCGTGAGTTTTCTTCCAACCCCTTCTTCATTGCTGGAGAGTCATATGCAGGAGTTTATGGTTACCTAGTTGGAAATGGTGTTACAGATGAACATATTGACGAATATGCTCTTTTTCCATTTATGCATGGGATGGGTCTTATCTCAGAGGTTAACCGCGAGTGTTTTGGGAATTTCTATAATTCACTCCGCGATAATTGTAGATACATGGTGGAAAAAGTTTTCGAGGTTATTATTGGGTTGAACATATATAACATTCTAGAACCATGCTATCATGGCACAGAGGCAGATAAGATTATCACATCCAATATTAGGTTGCCGTCTAGTTTCCGTGAGTTAGGTGAGACTGAGAAACCTCATCCTGTGAGGAAAAGAATATTCGGTCGTGCTTGGCCCCTTAGAGCGCCTGTGAGAGATGGCAACGTTCCAACTTGGCCACAACTTATCAATAGCAACAATGTTCCATGCACATTGAACAATGATGCAGTCAGAAAAGCACTTCACACTGCAGAGAAAAGTGTGGTCAGTAGTTGGGATTTATGCACAGACAAACTTTCCTTCGATCATGACGCTGGAAGCATGATAAAGTACCACAAGAAACTAACTTCCAGAGGATATCGAGCTCTTATATTCTGTGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCATGGACGAGATCAATTGGATACAAGATTGTTGATGAATGGCGGCCTTGGTTATCCAATGGTCAAGTTGCCGGGTATACTCAAGGATATGACCACAATCTTACTTTTCTGACCATAAAGGGAGCTGGACATACTGTTCCAGAATACAAACCACAAGAGGCATTGGATTTTTATAAACGTTTTCTCGCTAGATTACAAATATGA 1380 0.4123 MNKTVSTVCLVLLHIYLSIVLTISAPQSAIVTQVPGFNGTIPSKHYAGYVTVDESHGRNLYYYFVESEGKPSEDPVVLWLNGGPGCSSMDGFIYEHGPFNFEAAKTKGSLETLHLNPYSWTKVSSIIYLDSPAGVGFSYSENESDYITGDIKTASDTHAFLLKWFELYREFSSNPFFIAGESYAGVYGYLVGNGVTDEHIDEYALFPFMHGMGLISEVNRECFGNFYNSLRDNCRYMVEKVFEVIIGLNIYNILEPCYHGTEADKIITSNIRLPSSFRELGETEKPHPVRKRIFGRAWPLRAPVRDGNVPTWPQLINSNNVPCTLNNDAVRKALHTAEKSVVSSWDLCTDKLSFDHDAGSMIKYHKKLTSRGYRALIFCGDHDMCVPFTGSQAWTRSIGYKIVDEWRPWLSNGQVAGYTQGYDHNLTFLTIKGAGHTVPEYKPQEALDFYKRFLARLQI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1398 459 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Mal3g1398 459 Gene3D alpha/beta hydrolase 24 262 IPR029058 -
Mal3g1398 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Mal3g1398 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Mal3g1398 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
Mal3g1398 459 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Mal3g1398 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 188 455 IPR001563 GO:0004185|GO:0006508
Mal3g1398 459 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 18 187 - -
Mal3g1398 459 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Mal3g1398 459 SUPERFAMILY alpha/beta-Hydrolases 31 456 IPR029058 -
Mal3g1398 459 Gene3D alpha/beta hydrolase 292 458 IPR029058 -
Mal3g1398 459 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 188 455 - -
Mal3g1398 459 Pfam Serine carboxypeptidase 35 187 IPR001563 GO:0004185|GO:0006508
Mal3g1398 459 Pfam Serine carboxypeptidase 188 455 IPR001563 GO:0004185|GO:0006508
Mal3g1398 459 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 187 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1398 Mal-Chr3 60449740 60471222 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1398 326 455 Calmodulin-binding Proteins AT2G22960 45.385 2.17e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1398 K16296 - gmx:100792057 763.451