Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1355 ATGAATGAGATGAAGGCTATGCCCTTACCTTTTGAAGAATACATAGGAAAAGGGGTGTTAGATTTTGCTACAAGTGTTGGAAACAGTGTTGTTTCAGATTCATTTTTGTTTCAACAGCAAGAACAGTTTTTGCAAAGGTGGAGGGAAAATTGTTGCTATGCGGGCATTGAGCCCAATTCTGTTGTTGTTTTTGACCTCAAAAAACCAAATCCAGAAGCCACTCCTACTTCATCCTCAACACTGTCTTCCTCACACGGTAGCGCCGGAGGCGGCGCTTCCACCGATAGCACCACCGGCGCCGCCGCAGCTCAAGAAAACAATAACAAAACCATACCACAAGTTGAAGGTAAAAGATGTGGTGGAATGGAGGATTGGGAGAGTGTGTTATCTGAATCACCAAGTCAAGATCAAGATCATTCAATATTGAAATTGATTATGGAAGATATTGAAGATGCATCTATGGGATTAAGCAAGCTTTTACAAGTTGGAACTAGTAATTCTCATTCTCAACAAGATGTTGAATTCAATGGTTTTAGTTTTATGGATCAACAAAGTTCTGTGCTTGATCCTATTTCTTCAAATGTTAACAACAGCTTTGTAACTAGCATTGATTCTTCTTCTGTTGTTGCCACTACTAATACTACTGCTGAGATTTGTTCTGATTTCCCTTTTGGTAGAGTGATGAATCAAATTCAAAACCCTAATTTCAGTTCTTCACAAGTTTCACTTTCTCAGGGTGGTTTGTTTCATCATCAACAACAACAAACAATTGGGTCTCTTGATGAGAAGCTACCTCATCAATTTGTCATGAACCAAAACCAAGCTCAGTTTATACCTAACCCTAGTTTGGTTTTTCCTTTCACATATTCTCAGCTGCAAGAAAATCAAGAGATTCAGCTTCAGCCACCAGCTAAAAGACTCAATTGTGGAACGAATTATGAAATTCCAAAGATACCCTTTTTGGATTCTGGTCAAGAGATGTTTCTTAGGAGGCAACATCAGCATCAGCAGCAGCTTCAGCTGCTTCCTCACCATCTGCAGCAGAGGCCAATGGCACCTAAGCAGAAAATGGGGAACCCTGGAAGCGGTGGCGGCGAAGATATGCCGATTCATCAGTTTCAGCAGGCTATAATTGATCAGCTTTTCAAGGCTGCAGAACTTATAGACGCCGGTAATCCGGAACTCGCGCACGGGATATTGGCGCGGCTCAATCACCAAATTTCTCCTATTGGAAAGCCTTTTCAAAGGGCTGCTTTTTATTTCAAGGAGGCATTGCAATTGCTTCTTCAATCAAATGTCAACAGTAACAACAATAATAGCTTTTCACCAACTAGCCTCTTGCTCAAGATTGGTGCTTATAAATCATTCTCAGAAATCTCGCCTGTTCTGCAGTTTGCAAATTTCACTTCCAACCAAGCATTGCTTGAAGCTGTGGAAGGTTTCGATCGCATTCACATAATCGATTTTGATATTGGTTTTGGTGGACAGTGGTCTTCTTTTATGCAGGAGTTAGCACTCAGGAATGGTGGTGCACCTGCACTTAAGATCACTGCATTTGTTTCGCCTTCTCACCATGATGAAATTGAGCTTAGTTTCACTCATGAGAATCTGAAACAATATGCTGGTGAAATTAACATGTCATTTGAGCTTGAGATTCTGACACTCGAGTCTTTGAATTCTGTTTCGTGGCCGCAGCCACTACGCGATTGCGAAGCAGTTGTGGTTAACTTGCCTATTTGCTCTTTCTCAAATCACTCTTCATACCTGCCTTTGGTGCTTCGATTCGTGAAGCAGCTCATGCCTAAAATTGTGGTAACCTTGGATAGGAGTTGTGACCGAACCGATGCGCCCTTTCCTCAGCATATGATTTTCGCACTCCAGTCTTATTCCGGTTTGCTTGAATCACTTGATGCTGTTAGTGTTAATGTCCACCCGGATGTACTTCAGATGATCGAGAAATACTATCTTCAACCGGCAATTGAGAAGCTTGTTTTGGGCCATCTGCGTTCACAGGACCGAACACTTCCTTGGAAAAACTTGCTCTTGTCGTCAGGGTTCTCACCGTTGACATTTAGTAACTTCACAGAGTCGCAAGCAGAGTGTTTGGTGCAGAGGATTCCTGGTAGGGGATTCCATGTGGAGAAGAAGCAGAATTCGCTCGTTTTGTGTTGGCAAAGGAAGGATCTCATCTCGGTTTCGACTTGGAGATGCTGA 2214 0.4237 MNEMKAMPLPFEEYIGKGVLDFATSVGNSVVSDSFLFQQQEQFLQRWRENCCYAGIEPNSVVVFDLKKPNPEATPTSSSTLSSSHGSAGGGASTDSTTGAAAAQENNNKTIPQVEGKRCGGMEDWESVLSESPSQDQDHSILKLIMEDIEDASMGLSKLLQVGTSNSHSQQDVEFNGFSFMDQQSSVLDPISSNVNNSFVTSIDSSSVVATTNTTAEICSDFPFGRVMNQIQNPNFSSSQVSLSQGGLFHHQQQQTIGSLDEKLPHQFVMNQNQAQFIPNPSLVFPFTYSQLQENQEIQLQPPAKRLNCGTNYEIPKIPFLDSGQEMFLRRQHQHQQQLQLLPHHLQQRPMAPKQKMGNPGSGGGEDMPIHQFQQAIIDQLFKAAELIDAGNPELAHGILARLNHQISPIGKPFQRAAFYFKEALQLLLQSNVNSNNNNSFSPTSLLLKIGAYKSFSEISPVLQFANFTSNQALLEAVEGFDRIHIIDFDIGFGGQWSSFMQELALRNGGAPALKITAFVSPSHHDEIELSFTHENLKQYAGEINMSFELEILTLESLNSVSWPQPLRDCEAVVVNLPICSFSNHSSYLPLVLRFVKQLMPKIVVTLDRSCDRTDAPFPQHMIFALQSYSGLLESLDAVSVNVHPDVLQMIEKYYLQPAIEKLVLGHLRSQDRTLPWKNLLLSSGFSPLTFSNFTESQAECLVQRIPGRGFHVEKKQNSLVLCWQRKDLISVSTWRC* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1355 737 Pfam GRAS domain family 378 736 IPR005202 -
Mal3g1355 737 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 23 736 IPR005202 -
Mal3g1355 737 MobiDBLite consensus disorder prediction 71 113 - -
Mal3g1355 737 ProSiteProfiles GRAS family profile. 368 736 IPR005202 -
Mal3g1355 737 PANTHER SCARECROW-LIKE PROTEIN 6 23 736 - -
Mal3g1355 737 MobiDBLite consensus disorder prediction 71 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1355 Mal-Chr3 58962509 58964974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1355 353 737 GRAS Transcription Factor Family AT4G00150 57.216 3.02e-141 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal3g1355 GRAS 1.8e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1355 - - gmx:100805945 891.338