Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1343 ATGGCAAAGATTCACGGATTTAAGCTTGGGAAGCGCCTCGTCCGAGTTTCCAAATGGATGTTTAATAAGACCCGAACCCGAACGAGATATCATCGCTTTGATTCTCCTGCTCAACCTCCATCAATGAAGATTCTCAAGTGGGGAAGAAAGATTAGAGCAGGTGCTATGTCACTTTTTAACAGGTCGAGTTATGCTCGGTTAGGATCCAACCCAAATTTCAGCGTGCCGAAGGGACACATGGTTGTGTATGTGGGAGAGAAAGAAGAAGAGGTAAATAGGGTTATGGTGCCAGTGATATACTTTAACCATCCATTGTTTGGTGAATTACTTAAAGAGGCTGAGGAGGAGTATGGGTTCAACCAAAAAGGGGGGATCACAATACCATGTAGGTTTACGGAATTTGAACAGGTCAAGACATGGATTGCATCAGGATCCACAACTGGACTAGTCAAAAATTGA 459 0.4357 MAKIHGFKLGKRLVRVSKWMFNKTRTRTRYHRFDSPAQPPSMKILKWGRKIRAGAMSLFNRSSYARLGSNPNFSVPKGHMVVYVGEKEEEVNRVMVPVIYFNHPLFGELLKEAEEEYGFNQKGGITIPCRFTEFEQVKTWIASGSTTGLVKN* 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1343 152 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 146 IPR003676 GO:0009733
Mal3g1343 152 PANTHER SMALL AUXIN-UP RNA-RELATED 1 146 - -
Mal3g1343 152 Pfam Auxin responsive protein 61 138 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1343 Mal-Chr3 58598972 58599430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1343 71 134 Calmodulin-binding Proteins AT5G20810 48.438 1.33e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1343 K14488 - mtr:MTR_0388s0020 244.588