Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1338 ATGGATAATGATGATATTACACGACTCATTCATAAAGATCTATTGGAAAGACTTGGATGGGAAACTCATACAGTGAAAAATAGCAAAGAAGGTCTAGACTTAATTGATTGGGGTGCTAACAAATTTGAGATAATTCTCATGGATAGGCAAATGCCAGTCATGGATGGGATTAAGACTCAAAGATCTTGCAAGCAACAAGGTACTAGCTTGATTGTTGGTGTGTCGGAGCGTCGCCTAACAGAAGTAGAATGGGATGAATTTTTTAGGGCGGGTCTAGATGATATTCGTTATGAAGGAAAACCCTTGTCTCTTGACGAATTTAAAGTTATTGTTGAATCAGTCCCCACCAGGTACCCTAGCTTGATTGTTGGTGTGTCGGAGCGCCGCCTAACAGAAGTAGAATGGGAAGAATTTTTTAGGGTGGGGCTAGATGATATTCGTTATGAAGGAAACCCCATGTTTCTTGACGAACTTAAAGTTATTGTTGAATCAGTTTTTGAAATCGAAGGAGAAGTGGTGGAAGCGGCTGTTTAA 534 0.4007 MDNDDITRLIHKDLLERLGWETHTVKNSKEGLDLIDWGANKFEIILMDRQMPVMDGIKTQRSCKQQGTSLIVGVSERRLTEVEWDEFFRAGLDDIRYEGKPLSLDEFKVIVESVPTRYPSLIVGVSERRLTEVEWEEFFRVGLDDIRYEGNPMFLDELKVIVESVFEIEGEVVEAAV* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1338 177 CDD REC_hyHK_CKI1_RcsC-like 2 111 - -
Mal3g1338 177 ProSiteProfiles Response regulatory domain profile. 1 115 IPR001789 GO:0000160
Mal3g1338 177 PANTHER TWO-COMPONENT RESPONSE REGULATOR 2 114 - -
Mal3g1338 177 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 2 114 - -
Mal3g1338 177 Pfam Response regulator receiver domain 2 94 IPR001789 GO:0000160
Mal3g1338 177 SUPERFAMILY CheY-like 2 114 IPR011006 -
Mal3g1338 177 SMART REC_2 1 111 IPR001789 GO:0000160
Mal3g1338 177 Gene3D - 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1338 Mal-Chr3 58559089 58560021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1338 1 103 Response Regulator Gene Family AT3G04280 34.615 1.12e-12 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal3g1338 Response_reg 1.5e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1338 - - cam:101493171 103.99