Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1335 ATGGATCTTACTTTAGTACATGCATTCTTTCATATATTCATCTTTGTAGGTTCACTTTCAATATTCCTAGTGACCCCTTCCTATGGTCTTAATCCTAGGAAGCTTCTTAATGTCACATTAAACTCCTCCACTGATTCACCTTTTTCTTCTTCTTCATTGGCTAGTTTTTATGGACCTCCCAACGGTGATGGAAGTGAAGGTGGTGCTTGTGGATATGGAAATGCTGTTGGGCTGCCTCCATTCAACTCATTGATATCGGCCGGAGGCCGTGCCATATTTAAATCGGGGAAAGGATGTGGCACTTGTTATCAGGTGAGGTGTGTAGGAAATCGTGCTTGCTCAGGAAACCCTGTTACTGTAGTTATCACTGATGAGTGTCCTGGTTGTAATTATGATTTTGATATGAGTGGTAGAGCTTTTGGTGCCATGGCAGTTTCAGGTCAAGCTAACAACCTACGCAATGCTGGGAAAGTTATCGTTCAATATAGGAGAGTTCCATGCAACTACCCTGGAGTACCAATAACTTTCCATGTGGACTCTGGATCCAACCAAGATTATTTTGCTACCCTAATTGAATTTGAGGATGGGGATGGTGATCTAAAAACAGTAGAACTTAAAGAAGCTCGCTCAACAACTTATGAAAGTATGCAACAATCATTTGGTGCTGTTTGGAAATTGAATAAAGGGGCACCACTGATAGCACCATTTTCTATAAGACTAACAACAATTGAGTCTGGCAAGGTATTTGAAGCAAAGAATGTGATCCCTTTTGGTTGGATGCCTGGTCAAACTTTTAGAGCAATTGGGAATTTTAATTAA 819 0.4066 MDLTLVHAFFHIFIFVGSLSIFLVTPSYGLNPRKLLNVTLNSSTDSPFSSSSLASFYGPPNGDGSEGGACGYGNAVGLPPFNSLISAGGRAIFKSGKGCGTCYQVRCVGNRACSGNPVTVVITDECPGCNYDFDMSGRAFGAMAVSGQANNLRNAGKVIVQYRRVPCNYPGVPITFHVDSGSNQDYFATLIEFEDGDGDLKTVELKEARSTTYESMQQSFGAVWKLNKGAPLIAPFSIRLTTIESGKVFEAKNVIPFGWMPGQTFRAIGNFN* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1335 272 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 67 172 IPR007112 -
Mal3g1335 272 PANTHER EXPANSIN-B2-RELATED 9 271 - -
Mal3g1335 272 Pfam Expansin C-terminal domain 174 256 IPR007117 -
Mal3g1335 272 SUPERFAMILY PHL pollen allergen 174 266 IPR036749 -
Mal3g1335 272 PANTHER EXPANSIN-B3 9 271 - -
Mal3g1335 272 PRINTS Expansin/Lol pI family signature 155 171 IPR007118 GO:0005576
Mal3g1335 272 PRINTS Expansin/Lol pI family signature 253 267 IPR007118 GO:0005576
Mal3g1335 272 PRINTS Expansin/Lol pI family signature 89 107 IPR007118 GO:0005576
Mal3g1335 272 PRINTS Expansin/Lol pI family signature 48 63 IPR007118 GO:0005576
Mal3g1335 272 PRINTS Expansin/Lol pI family signature 213 227 IPR007118 GO:0005576
Mal3g1335 272 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Mal3g1335 272 Gene3D - 34 168 IPR036908 -
Mal3g1335 272 PRINTS Major pollen allergen Lol pI signature 107 117 IPR005795 GO:0005576|GO:0019953
Mal3g1335 272 PRINTS Major pollen allergen Lol pI signature 176 191 IPR005795 GO:0005576|GO:0019953
Mal3g1335 272 PRINTS Major pollen allergen Lol pI signature 192 207 IPR005795 GO:0005576|GO:0019953
Mal3g1335 272 PRINTS Major pollen allergen Lol pI signature 144 159 IPR005795 GO:0005576|GO:0019953
Mal3g1335 272 PRINTS Major pollen allergen Lol pI signature 87 98 IPR005795 GO:0005576|GO:0019953
Mal3g1335 272 PRINTS Major pollen allergen Lol pI signature 222 239 IPR005795 GO:0005576|GO:0019953
Mal3g1335 272 SMART dpbb_1 85 162 IPR007112 -
Mal3g1335 272 Gene3D - 171 269 IPR036749 -
Mal3g1335 272 Pfam Lytic transglycolase 86 162 IPR009009 -
Mal3g1335 272 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 185 267 IPR007117 -
Mal3g1335 272 SUPERFAMILY Barwin-like endoglucanases 49 171 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1335 Mal-Chr3 58351218 58352874 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1335 1 271 Expansin Gene Family AT1G65680 49.091 1.86e-92 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1335 - - gmx:548090 360.918