Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1257 ATGACCTTTTCACAAAACAATAACAAAAGAGAAGCCATGGATGAACAACTTAACACTAGCAAAGGAATTTGGGATTTGTCCAAACAAAATCCCTTTCAATATTGTGCAACTTCACAATCTCGGTCCATAGACTCTCAATCACCAATAATAAGTTCTAGTTTTTCTATGACAAGTCCTTCCTCCATCAACCCATTTTCTATGATCTCTACCCCTTCTTACATGGCTTTAAACACATATGGATCTCAGAGAGAATTTTTCAAGGATCAAAACCCAATGACCTTTTCACAAAACAATAACAAAAGAGAAGCCATGGATGAACAACTTAACACTAGCAAAGGAATTTGGGATTTGTCCAATCAAAATCCCTTTCAATATTGTGCAACTTCACAATATCGGTCCATAGACTCTCAATCACCAATAATAAGTTGTGATGCAAATCCATTCATTGGTGGAATTGAAAATATACCCCAAGAAAATGATGAAGGACTCACTCTCTGTGACCAAAAGAGAAAAAAGAGGAGGCATAAGAATATTGAAATTCAACATACGGATTTCAATACAGTCAAAAGCCAATGGACTCCAGATGAGGATAGATATATCAAATCATATAAAATTTGTACTTTATCTACTATACATTGTTTTGATGGTTTTAGTATGGATTTGTTATATACTTTATTGGTTCAAGATATTTTTATAGAGTCGTGGAGTGAAGAGGAAGACAAAGTATTTATCGAAGCTCACAAGATAGTCGGGAACAGGTGGGCTGAAATTGCTAGTAGGCTTCCTGGACGCACCGAGAACTCTATTAAGAATCGTTGGAATTCAACTAAGCGTAGCCTAAACGCTACAAAGAAGCCAAACCGGCGAAATGGTTTGAAAGGAACACTACTTCATAAATACCTAAGTGAAATCACTGATACTAAGGATGTTCAAAGTAAGCCAAAGAATTCTACCAACATGATGAATATTGGGTATCAGACAAAATTTGACAATACCAATACCAACTTTGATCTTTGTCATGATCGATATGAAATTTCAGAGAGTGGTTTTAGCTCTGGAGGTTTGGCTACTCCAGTGGAAGAAGTTGGTGGCAATGTGGCAATGATGGTCAATGGTGATGATGAAATGGCAAGTGGGTCTGGCACAATAAATTATGAGTTTTGGTCGTATGAAATGGAGTTTTTTCCTGAGTTTTTACCCTATAGAGATGATCTATAG 1218 0.3637 MTFSQNNNKREAMDEQLNTSKGIWDLSKQNPFQYCATSQSRSIDSQSPIISSSFSMTSPSSINPFSMISTPSYMALNTYGSQREFFKDQNPMTFSQNNNKREAMDEQLNTSKGIWDLSNQNPFQYCATSQYRSIDSQSPIISCDANPFIGGIENIPQENDEGLTLCDQKRKKRRHKNIEIQHTDFNTVKSQWTPDEDRYIKSYKICTLSTIHCFDGFSMDLLYTLLVQDIFIESWSEEEDKVFIEAHKIVGNRWAEIASRLPGRTENSIKNRWNSTKRSLNATKKPNRRNGLKGTLLHKYLSEITDTKDVQSKPKNSTNMMNIGYQTKFDNTNTNFDLCHDRYEISESGFSSGGLATPVEEVGGNVAMMVNGDDEMASGSGTINYEFWSYEMEFFPEFLPYRDDL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1257 405 Gene3D - 234 295 - -
Mal3g1257 405 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 234 281 IPR017930 -
Mal3g1257 405 CDD SANT 234 277 IPR001005 -
Mal3g1257 405 ProSiteProfiles Myb-like domain profile. 234 277 IPR001005 -
Mal3g1257 405 PANTHER MYB PROTEIN-RELATED 229 326 - -
Mal3g1257 405 Pfam Myb-like DNA-binding domain 234 275 IPR001005 -
Mal3g1257 405 SUPERFAMILY Homeodomain-like 230 280 IPR009057 -
Mal3g1257 405 PANTHER MYB DOMAIN PROTEIN 100-RELATED 229 326 - -
Mal3g1257 405 SMART sant 231 279 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1257 Mal-Chr3 53696116 53709910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1257 188 304 MYB Transcription Factor Family AT4G18770 44.444 1.48e-21 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g1257 Myb_DNA-binding 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1257 K09422 - mtr:MTR_7g035350 352.443