Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1242 ATGTATAGAATAATATCCACGCCGGCATCCAAATTCCGCCAATTCCGGCGAATCCGATCCAAACCAACCATCACCTCCGCCGACGAGGAACAAGCTTCCCATATCCTACTATGGCGGTACCAGATCCTCGACCCAGACAGCGAACTCGTAGCCTATTGGAACAAAGTCTTCCTTGTCACCAGTCTTCTTGCATTGTTCATCGACCCTCTTTACTTCTTCCTCCCGACGGTTGGTGGGCCCGCTTGCATGACGGCGGATCCCAAACTCAGCATCTTGATAACCTTTCTCAGAACGTTTGCGGATTTGTTTTATGTTCTTCATATGGTTATGAAGTTTCGGACGGCTTTTGTTGCTCCTAATTCGAGGATTGTTGGTCGCGGTGAGCTTGTTATGGATCCTCGCCAGATTGCTTTGCGGTATTTGAAGTCTGATTTTGTTATTGATCTTGCTGCTACAATTCCATTGCCACAGATCGTTATTTGGTTAGTGATTCCAGCGAGTAGAGGCAGAAAAACAGATCATACCAACAACACTCTTGCACTTTTTGTTCTTATTCAGTATGTTCCTAGGCTCTTTCTCATCTTTCCTTTGAACGCTCGTATTCAAAAAACAACTGGTGTTATAGCCAAGACTCCCTGGATTGGTGCTGCATACAACCTTGTTCTATATATGCTAGCTAGCCATGTTACAGGAGCAACTTGGTACCTATCATCAATAGGAAGACAATTCAATTGCTGGAAAACGCAATGCGAACAGGAAAATAAATCTCATACCCTTACTTGCTTGCCAAGTTTTCTTGACTGTAATAGTTTGGATCTCCCTGAAAGACAGTACTGGCTAAACATCACACATGTTATTAGCAAGTGTGATGCGAAGAGCAAGATCAACATCAAATACAAGTTTGGGATGTTTGCAGATGCTTTTATCAATGATGTTGTCACTACTAATTTTAAGGAAAGATACTACTATTGTCTTTGGTGGGGTTTAAGAAATTTAAGTTCTTATGGACAAAATTTGGACACCACGACATACCTTTTAGAGACACTTTTTTGCATCGTCTTATGCATTGCTGGATTAGTTCTCTTTTCACTTTTGATTGGAAACATGCAGACATACTTGCAATCGATGACAGTTAGACTAGACGAATGGAGGATTCGAAAAAGAGATACAGAGGAGTGGATGAGGCATCGACAGTTACCTCAAGAATTGCAGGAACGTGTCCGTCGCTTCGTTCAATATAAATGGCTAGCTACTAGAGGAGTAGATGAAGAGGCCATACTGCTTTCCTTACCTTTGGATCTTCGCCGCGAAATTCAACATCACTTGTGTCTCTCTCTAGTGCGACGTGTGCCATTCTTCTCGCAAATGGATGATCAACTACTTGATGCAATATGTGAACGCCTTGCATCATCATTAAGCACACAAGGCACATATATATTTCAAGAGGATGATCCGGTAGATGAAATGTTATTTATCATTAGAGGGACACTGGAGAGTTCTACAACCAATGGAGGAAGGTATGGATTCTTCAATTCAATCACACTAAGGCCAGGAGACTTTTGTGGAGAAGAATTGTTAACATGGGCTTTAATGCCAAACTCAACTCTCAATTTACCTTCCTCTACTCGTACTGTAAAAGCTCTTACCGAAGTAGAAGCTTTTTCGCTACAAGCAGAGGATCTAAAATTTGTGGCGAGCCAGTTTAAGCGTCTTCACAGCAAGAAACTTCAGCATGCCTTTAGATATTATTCACAACAATGGAGAACATGGAGTGCTTGTTTCATACAAACAGCGTGGCGAAAGCATCAGAAAAGAAAGGCAACGAGGGAGTTGTCAATTAAAGAGGGACTTTACTACATGGTGGATCCTGAGATTGAAGAATCATCAGGGAATGGTAAAAATGTTAATAACCTTGGTGCTACTGTTTTGGCTTCAAGATTTGCTGCAAATACAAAGAAAGGGCATGATAAGATTCAAGACAGTGATCCTGTTCCGCAGTTGTTTAAACCTGATGAACCTGATTTCTCTGAAGACCATGCTGATAATGTTTAG 2052 0.4162 MYRIISTPASKFRQFRRIRSKPTITSADEEQASHILLWRYQILDPDSELVAYWNKVFLVTSLLALFIDPLYFFLPTVGGPACMTADPKLSILITFLRTFADLFYVLHMVMKFRTAFVAPNSRIVGRGELVMDPRQIALRYLKSDFVIDLAATIPLPQIVIWLVIPASRGRKTDHTNNTLALFVLIQYVPRLFLIFPLNARIQKTTGVIAKTPWIGAAYNLVLYMLASHVTGATWYLSSIGRQFNCWKTQCEQENKSHTLTCLPSFLDCNSLDLPERQYWLNITHVISKCDAKSKINIKYKFGMFADAFINDVVTTNFKERYYYCLWWGLRNLSSYGQNLDTTTYLLETLFCIVLCIAGLVLFSLLIGNMQTYLQSMTVRLDEWRIRKRDTEEWMRHRQLPQELQERVRRFVQYKWLATRGVDEEAILLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLASSLSTQGTYIFQEDDPVDEMLFIIRGTLESSTTNGGRYGFFNSITLRPGDFCGEELLTWALMPNSTLNLPSSTRTVKALTEVEAFSLQAEDLKFVASQFKRLHSKKLQHAFRYYSQQWRTWSACFIQTAWRKHQKRKATRELSIKEGLYYMVDPEIEESSGNGKNVNNLGATVLASRFAANTKKGHDKIQDSDPVPQLFKPDEPDFSEDHADNV* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1242 683 Gene3D Helix hairpin bin 380 443 - -
Mal3g1242 683 CDD CAP_ED 452 583 IPR000595 -
Mal3g1242 683 SUPERFAMILY Voltage-gated potassium channels 45 374 - -
Mal3g1242 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 31 677 - -
Mal3g1242 683 SUPERFAMILY cAMP-binding domain-like 383 577 IPR018490 -
Mal3g1242 683 SMART cnmp_10 452 583 IPR000595 -
Mal3g1242 683 Gene3D - 59 377 - -
Mal3g1242 683 Pfam Cyclic nucleotide-binding domain 475 563 IPR000595 -
Mal3g1242 683 ProSiteProfiles cAMP/cGMP binding motif profile. 452 582 IPR000595 -
Mal3g1242 683 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 18 31 677 - -
Mal3g1242 683 Gene3D Jelly Rolls 450 570 IPR014710 -
Mal3g1242 683 MobiDBLite consensus disorder prediction 653 683 - -
Mal3g1242 683 Pfam Ion transport protein 52 379 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1242 Mal-Chr3 52573604 52578045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1242 18 681 Ion Channels AT5G14870 66.908 0.0 969
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1242 K05391 - gmx:100802812 1211.44