Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1235 ATGCAACTCCGCCGGAAGCCCTGTAAGAAAAATGGACCACTTATCTCATTTCACGATGAATATTTGTTGAGCGGAAGGCCCAATGACTACATGCCTCTATTGATCTGGGTCGTTATAGCAAACTATGACGTGCGAAGAATTCTTATCGACCAAGGATTCTCCATGGACGTAATGCACAAGGATAATGAAGACAAAGAGAAGTCCAAGAAAGAAAAGGGACCTCAAGCAAACAACGTAAATGCAGATGAGTTCAACTCCAAAGTAGAACCAAAGTTTATTGATGAAGACGATGAGGAAGACGAAGCCTTACCCCTTGAACGTAGAAAAAAGCTTGAGAGGCCCAAACCAGATGGCAGCTTCATCGATCTCCCACTGCGGGAAGACGATAATCAAGTTGCTTTATTGGGTTGTTTTGCGTCTTTTATGGGATTGGAAACATCAATGTTTGCAGAGTTTGCAGGTATGGTTGCGGCACTTGAACAAGCTTTTTCTAAAGAGATCTCAAAAATGGTTCCTTTCCGATTAAGTTCAGTTGTTCCACCTTCATCATCAAATTACACCGCCTACTTGTACCAAAATCACTGCAATCAATTTTTGAATGAGGCTAACGATTACTCTAGTTTTTCTACCTTGGGTCCTTCCTCCATCAATCCATTATCACTAGTTTATGATGAACATCGCTCTATATTAATTAAGCCTAATATTCAAGGAAATATTTCGTGCAATGGTGGAATTGGAACCAAACCCCGAGAAAATGATCAAGAACTCATTCTCAGTGACCAAAAGCAACGAAAGATGTTTCAGAGGAATTGTGAAATTCAAGACAAAGATTCCAATATAATCAAAGGTCAATGGACTGCGAATGAGGATAGGATTCTTGTCCAATTGGTTGGTCGCTTTGGGCGTAGAAAATGGTCCCATATTGCCAAGTTTCTTAATGGTAGGATCGGGAAACAGTGCAGGGAGAGATGGAATCACCATCTTCGACCGGACATTAAGAAGGAGTCATTGACGGAAGAAGAGGAAAAAGTATTGATTGAAACTCACAAGATAGTTGGGAACAGGTGGGTTGAAATTGCAAGGAGATTGCCAGGGCGCACCGACAACTTTATCAAGAACCACTGGAACACCATGAAGCGCCGCCAAAATGCTAAGAGGAAGAACCAAGGTAATAGCTCAATGGGAACATTACTTCAAAAATACATAATGGAAGTCACTGATAATAAGGAATTTGAAAAGGAAATGTTGAATAATTCCATGAGCATGATGAATATTGGGAATCCGCCAAATTTTGAAAGTTCAAATAGTAATTTGAGTTCAAAAAGTTTGGCTGCTCCAGAGAAAGAGATTGATGGGTATGTGCCAATGATTTTCAATGGTGATGATGGAATTGTATATGGCTCTGATACCGCAATGAATTATGAGTTTGGATCATATGGAATGGAGTTTTTTCATGAGGTTCATATGAAGCAGGAAATGGATCTCATGGAGATGATCTATAAAAGTCCTTAA 1512 0.3995 MQLRRKPCKKNGPLISFHDEYLLSGRPNDYMPLLIWVVIANYDVRRILIDQGFSMDVMHKDNEDKEKSKKEKGPQANNVNADEFNSKVEPKFIDEDDEEDEALPLERRKKLERPKPDGSFIDLPLREDDNQVALLGCFASFMGLETSMFAEFAGMVAALEQAFSKEISKMVPFRLSSVVPPSSSNYTAYLYQNHCNQFLNEANDYSSFSTLGPSSINPLSLVYDEHRSILIKPNIQGNISCNGGIGTKPRENDQELILSDQKQRKMFQRNCEIQDKDSNIIKGQWTANEDRILVQLVGRFGRRKWSHIAKFLNGRIGKQCRERWNHHLRPDIKKESLTEEEEKVLIETHKIVGNRWVEIARRLPGRTDNFIKNHWNTMKRRQNAKRKNQGNSSMGTLLQKYIMEVTDNKEFEKEMLNNSMSMMNIGNPPNFESSNSNLSSKSLAAPEKEIDGYVPMIFNGDDGIVYGSDTAMNYEFGSYGMEFFHEVHMKQEMDLMEMIYKSP* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1235 503 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 333 383 IPR017930 -
Mal3g1235 503 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 277 332 IPR017930 -
Mal3g1235 503 SUPERFAMILY Homeodomain-like 279 375 IPR009057 -
Mal3g1235 503 Pfam Myb-like DNA-binding domain 285 343 - -
Mal3g1235 503 ProSiteProfiles Myb-like domain profile. 277 328 IPR001005 -
Mal3g1235 503 CDD SANT 338 379 IPR001005 -
Mal3g1235 503 ProSiteProfiles Myb-like domain profile. 329 379 IPR001005 -
Mal3g1235 503 Gene3D - 281 334 - -
Mal3g1235 503 SMART sant 333 381 IPR001005 -
Mal3g1235 503 SMART sant 281 330 IPR001005 -
Mal3g1235 503 MobiDBLite consensus disorder prediction 61 81 - -
Mal3g1235 503 PANTHER MYB DOMAIN PROTEIN 100-RELATED 240 427 - -
Mal3g1235 503 CDD SANT 285 328 IPR001005 -
Mal3g1235 503 Gene3D - 337 394 - -
Mal3g1235 503 PANTHER MYB PROTEIN-RELATED 240 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1235 Mal-Chr3 52440317 52445374 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1235 274 402 MYB Transcription Factor Family AT4G18770 65.116 1.20e-54 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g1235 Myb_DNA-bind_6 2.7e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1235 K09422 - mtr:MTR_4g088015 385.956