Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1226 ATGGAATTAGATCAAGGTTTTGCAGAAAAATCAAAGATCCCTACTATGGCTCCTTCTCAACTAGGTTCATCTCTTTCGCCACCATCACATTACCCCACATATTTGTACCAAAATCAATTCAACCAATTTAAAGAACATCTTCTGAACGAGGCTAACCATCACTCTAGTTTTTCTACAGTGATTCCTTCCTCCATCAGCCCAATCCCTATGATCCCAACCTCTTCTTACAAGGCTGCACATACCAATGAGTTCCAGAGAGAATTTACCAGTTCTAGAAATCCAATGATCTTTGCGCCAAACTATAGCAAAATGGAAGTCATGCATGGTCGCCTTAACACTGGCAAAGGAATTTGGGATTTGTCTACAAAAAATATCTTTCAATATGGTGAAACTTCACAACCTCGTGTGAATCCCTCTCTATCACCATCACTAATTTATGATTCACACCCATCTGTTTCAGTTAAGCATGAGCTTCAAAGCGATCTTTCATGTAATGATGGAATCCAAAACAAATCCCAAGAAAATGATCATGGGCTCGTTCTTGGTGACAAAAAGCGACATAAGAGGATTCAGAAGAATGGTGAAATTCAACATGAAGATCCCAATATAATCAAAGGCCAGTGGACTGCGAATGAGGATAGGATTCTTGTCCAATTGGTGAACCGCTTTGGGCATAGAAAATGGTCTAAGATTGCTAAGTTTCTTAAAGGTAGGATCGGGAAGCAGTGCAGAGAGAGATGGAATAACCATCTTCGACCAAACATTAAGAAAGATTCATGGACCGAAGAGGAGGACAAAATTCTAATTGAAGCTCACAAGATAGTTGGGAACAAGTGGGCTGAAATTGCAAGGAGATTGACGGGCCGCACTGAGAACTCCGTCAAGAACCATTGGAACGCCACTAAGCGCCGCCTGGATGCCAAGAGGAAGAAACATGGTAATAGTTCAAAGGGAAAACTACTTTTGAAATACATAAAGGAAGTCACTGATGCTAAGGAAGCTGAAAAGGAGATGATGAAGAATTCTATGAACATGCCGAATATTGGAAATCAGTCAAATTTACAAATCGTAGAGAATGATTTTAGCTCTAAAGGTTTGGTTACTCCAAATGAAGAAAATGATGGGTATGTTCCAATGATATTCAATGGTGATGGTGGAAAGGAAAGTGGATTTGGCACCACAATGCATCATGAATTTGGATCATATGGATTACAGTTTTTTCCTGAGATTCCTATGAAGCAGGAAATTGATCTCATGAAGATGATCTATAGAAACCCTTAA 1281 0.3958 MELDQGFAEKSKIPTMAPSQLGSSLSPPSHYPTYLYQNQFNQFKEHLLNEANHHSSFSTVIPSSISPIPMIPTSSYKAAHTNEFQREFTSSRNPMIFAPNYSKMEVMHGRLNTGKGIWDLSTKNIFQYGETSQPRVNPSLSPSLIYDSHPSVSVKHELQSDLSCNDGIQNKSQENDHGLVLGDKKRHKRIQKNGEIQHEDPNIIKGQWTANEDRILVQLVNRFGHRKWSKIAKFLKGRIGKQCRERWNNHLRPNIKKDSWTEEEDKILIEAHKIVGNKWAEIARRLTGRTENSVKNHWNATKRRLDAKRKKHGNSSKGKLLLKYIKEVTDAKEAEKEMMKNSMNMPNIGNQSNLQIVENDFSSKGLVTPNEENDGYVPMIFNGDGGKESGFGTTMHHEFGSYGLQFFPEIPMKQEIDLMKMIYRNP* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1226 426 PANTHER MYB DOMAIN PROTEIN 100-RELATED 130 351 - -
Mal3g1226 426 Pfam Myb-like DNA-binding domain 208 263 - -
Mal3g1226 426 PANTHER MYB PROTEIN-RELATED 130 351 - -
Mal3g1226 426 CDD SANT 259 302 IPR001005 -
Mal3g1226 426 SMART sant 256 304 IPR001005 -
Mal3g1226 426 SMART sant 204 253 IPR001005 -
Mal3g1226 426 SUPERFAMILY Homeodomain-like 202 298 IPR009057 -
Mal3g1226 426 CDD SANT 208 251 IPR001005 -
Mal3g1226 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 200 255 IPR017930 -
Mal3g1226 426 ProSiteProfiles Myb-like domain profile. 252 302 IPR001005 -
Mal3g1226 426 MobiDBLite consensus disorder prediction 1 22 - -
Mal3g1226 426 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 256 306 IPR017930 -
Mal3g1226 426 ProSiteProfiles Myb-like domain profile. 200 251 IPR001005 -
Mal3g1226 426 Gene3D - 258 323 - -
Mal3g1226 426 Gene3D - 204 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1226 Mal-Chr3 52241052 52245798 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1226 203 328 MYB Transcription Factor Family AT4G18770 66.667 6.51e-56 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g1226 Myb_DNA-bind_6 1.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1226 K09422 - mtr:MTR_4g088015 584.719