Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1220 ATGCCTATGACAAAAATGATTGAGACGTGGAGTGAAGAGGAGGAAAACATACTAATTAAAGCTCACAAGATATTCGGGGACAATTGGCCTGAAATTTCAAGAAGATTGCCAGGGCGTAACGAGATTTCCATTGAGAATCATTGGAACGCCATTGAGCGTGTCCGAAATGCCAAGAAGAATTTCATGATCAGTATGATCAAAAGTGAGAACCAACCATACTACAACAATATCAATAAGAGTTCAGAGAATGATTTTGAAGGTGTAGCTAGTCCAGAGGATGAACTTGATAGATATGTGCCAATGACGTTCAATGGGGATTATGGGTTATATGGAATGGTGTTTTATCCCGAGGTTTCCATGAAGCAAGAAATTGATTTCATGAAGTTGTTATGTAGTAACCTTTAA 405 0.3827 MPMTKMIETWSEEEENILIKAHKIFGDNWPEISRRLPGRNEISIENHWNAIERVRNAKKNFMISMIKSENQPYYNNINKSSENDFEGVASPEDELDRYVPMTFNGDYGLYGMVFYPEVSMKQEIDFMKLLCSNL* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1220 134 Pfam Myb-like DNA-binding domain 9 49 IPR001005 -
Mal3g1220 134 PANTHER MYB DOMAIN PROTEIN 100-RELATED 7 82 - -
Mal3g1220 134 SUPERFAMILY Homeodomain-like 8 58 IPR009057 -
Mal3g1220 134 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 59 IPR017930 -
Mal3g1220 134 SMART sant 6 54 IPR001005 -
Mal3g1220 134 CDD SANT 9 49 IPR001005 -
Mal3g1220 134 PANTHER MYB PROTEIN-RELATED 7 82 - -
Mal3g1220 134 Gene3D - 9 84 - -
Mal3g1220 134 ProSiteProfiles Myb-like domain profile. 10 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1220 Mal-Chr3 52100697 52101861 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1220 8 59 MYB Transcription Factor Family AT4G18770 57.692 3.30e-15 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g1220 Myb_DNA-binding 2.3e-11 CL0123