Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1208 ATGGTTCTCTTGCAAAAAAGTTCTACTCTTTCACCTGCACCATCAACCAACAACAATATTTTAAACCATCAATACAACCAATTTAATGAACATCCTCTGAATAGGGCTAACCATCAAGCTAATTTTTCTACGGTAGTTCCTTCCTCCATCAACCCATTTTCTATGATCCCTACCCCTTCTTACAAGGCTACAAACCCAAATGGATCCCAGAGAGAATTTTTCAATGATCAAAATTCAATTATCTTTTCACCAAACAATAACAAAATAGAAGCCATGCATGAACAACTTAACACTAGCAAAGGAATTTGGGATTTGTCCAAACAAAATCACTTTTACTATGCTACAACTTCACAATCTCGGGTTAGCCCCCCTTTATCGCCTTCATTGTTTTTTGATGCAAATCCATCTTTGTTAGTTGAGCCTGGGTTTCAAGCCGATCTGTCATGCACTAGAAATAATCCCCTAGAAAAAAATGAAGGACTCAATCTAGTTGACCAAAATCCAGAAAAGAGGGTTCATGAGAATATTGAAATCCAACAAAAGGATTTCAATTCAGTCAAAATCCCATGGACTCCAGATGAGGATAGGGTTCTTGTCCAATTGGTGAAGAAACATGGAGTTAATAAATGGTCTGAGATTGCTAAGTCTATGAATGGAAGGATCGGAAAACAGTGCAGGGAGAGGTGGTGTAACAATCTTCGGCAGGACATTAAGAAAGACTCATGGAGTGAAGAGGAAGAGAAAATATTTATCAAAGCTCACAAGATAGTTGGGAACAAGTGGGCTGAAATTGCTAGTAGACTTCCTGGACGCACTGAGAACTCCATCAAGAACCGCTGGAACTCCACTAAGCGCAGCCTAAATGCTACAAAAAGGCCTAACCGACGAAATGGTTTGAAAGGAACACTACTTCATAAATACATCAGCGAAATCGCTGATTCTAAGGATGTTCAGAACAAGCCTGAAAATACCAACATGATGAATTTTGGGTGTCAGACAAATTTCAACAATACCAATACCACCGTTGGTCTTAGTCATGGTCGATATGAAATTTCAGAGAGTGTTTTTAGCTTTGAAGGTTTGGCTACTCCAACAGAAGAACTTGGTGGCAATATGGAAATGATGCTCAATGGTGATGATGGAATGGCAAGTGGCTCTGGCACGATGAATTATGAGTTTGAATCGTATGGAACGGAATTTTTTCCCGAGTTTTTACCGCTTGGAGATGATCTATAG 1236 0.3932 MVLLQKSSTLSPAPSTNNNILNHQYNQFNEHPLNRANHQANFSTVVPSSINPFSMIPTPSYKATNPNGSQREFFNDQNSIIFSPNNNKIEAMHEQLNTSKGIWDLSKQNHFYYATTSQSRVSPPLSPSLFFDANPSLLVEPGFQADLSCTRNNPLEKNEGLNLVDQNPEKRVHENIEIQQKDFNSVKIPWTPDEDRVLVQLVKKHGVNKWSEIAKSMNGRIGKQCRERWCNNLRQDIKKDSWSEEEEKIFIKAHKIVGNKWAEIASRLPGRTENSIKNRWNSTKRSLNATKRPNRRNGLKGTLLHKYISEIADSKDVQNKPENTNMMNFGCQTNFNNTNTTVGLSHGRYEISESVFSFEGLATPTEELGGNMEMMLNGDDGMASGSGTMNYEFESYGTEFFPEFLPLGDDL* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1208 411 SMART sant 238 286 IPR001005 -
Mal3g1208 411 SMART sant 186 235 IPR001005 -
Mal3g1208 411 MobiDBLite consensus disorder prediction 1 20 - -
Mal3g1208 411 Gene3D - 187 238 - -
Mal3g1208 411 ProSiteProfiles Myb-like domain profile. 189 233 IPR001005 -
Mal3g1208 411 CDD SANT 189 233 IPR001005 -
Mal3g1208 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 182 237 IPR017930 -
Mal3g1208 411 PANTHER MYB DOMAIN PROTEIN 100-RELATED 83 339 - -
Mal3g1208 411 Pfam Myb-like DNA-binding domain 190 248 - -
Mal3g1208 411 SUPERFAMILY Homeodomain-like 185 280 IPR009057 -
Mal3g1208 411 CDD SANT 241 284 IPR001005 -
Mal3g1208 411 Gene3D - 240 302 - -
Mal3g1208 411 ProSiteProfiles Myb-like domain profile. 234 284 IPR001005 -
Mal3g1208 411 PANTHER MYB PROTEIN-RELATED 83 339 - -
Mal3g1208 411 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 238 288 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1208 Mal-Chr3 51511262 51513916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1208 186 311 MYB Transcription Factor Family AT4G18770 61.111 1.76e-46 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g1208 Myb_DNA-bind_6 7.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1208 K09422 - mtr:MTR_7g035350 510.76