Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1207 ATGCCAAACATGACTATGACCAACATTGGTATTAGTATTGTCGAAAATTTTCTAATAAACAATATTCATCATGTTGGTAGAATTCTTCGGCTTGTTTTGAACCTCCTTAGAATCAGTGATTTTGCTGATGAATTTATAAAGCAGTGTTTCTATCAAACTATTTCACCAGTTCGACTTCTTTGTAGCTTTTCGACTCCGCACAGTGGAGTTCCAGCGGTTCTTGATGGACTTCTCGCTGCGTCTAGGAAGTCTACTATCAATTTCAGCCCACTTGTTACCAAATATCTTAAAGAGTCATGGAGTGAAGGCGAAGAAAAAATATTTCTCGAAGCTCACAAGATATTTGGTAACAAGTGGGTTGAAATTTCTAGTAGACTTCCTAGACGCAACGAGAAGTCCATCAAGAACCGATGGAACTCCACTAAGCGGATCATAAACGCTACAAAGAAGCTGAACTGGCGAAATAGTTTGAAAGGAACAATACTTTATAAATTCAATAGCGAAAACTCAGATTCTAAGGATGTTCAAAACAAGCCGAAGAATTCTACCAACATGATGATTATTGTGTATTAG 573 0.3735 MPNMTMTNIGISIVENFLINNIHHVGRILRLVLNLLRISDFADEFIKQCFYQTISPVRLLCSFSTPHSGVPAVLDGLLAASRKSTINFSPLVTKYLKESWSEGEEKIFLEAHKIFGNKWVEISSRLPRRNEKSIKNRWNSTKRIINATKKLNWRNSLKGTILYKFNSENSDSKDVQNKPKNSTNMMIIVY* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1207 190 PANTHER MYB PROTEIN-RELATED 95 167 - -
Mal3g1207 190 CDD SANT 99 142 IPR001005 -
Mal3g1207 190 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 146 IPR017930 -
Mal3g1207 190 PANTHER TRANSCRIPTION FACTOR MYB98 95 167 - -
Mal3g1207 190 SUPERFAMILY Homeodomain-like 91 146 IPR009057 -
Mal3g1207 190 ProSiteProfiles Myb-like domain profile. 97 142 IPR001005 -
Mal3g1207 190 SMART sant 96 144 IPR001005 -
Mal3g1207 190 Pfam Myb-like DNA-binding domain 97 140 IPR001005 -
Mal3g1207 190 Gene3D - 98 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1207 Mal-Chr3 51422814 51423743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1207 97 143 MYB Transcription Factor Family AT4G18770 61.702 4.31e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g1207 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1207 K09422 - mtr:MTR_7g035350 112.849