Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1206 ATGGTTCCTTCATCTAGAGACTCAATTTATGTGAACCCAACCCCTTCATACATGATTTCACACAACAATGGGTCCCAGAGAGAACTTCTCAGTGCTCGAAATCAAATGATCTTTGCACCAAACAGTAACAAAATAGAATCCACAAATGGTCGCCTAAACACTAGCAAAGGAATTTGGGATTTGTCCAAAAAAAATATCTTTGAATATGGTGAAACTACACAACATCAGGTCAGTCCCGCTCTATCACCACTACCAGTTTATGATGCATATCTATCTCTGTCAGTTAAACCTGAAATTGAAGGCGATCTTTCTTCCAATGGTTGTATTGGAAACATACCCCGAGAAAATGATCAAGGACATGTTCCTAGTGTACGGATGCGGCATGAGAGGATTCAGAAGAATAGTGAGATTCAAAGCAAGGATCTCAATATAATCAAAGGCCAATGGACCGCAAATGAGGACAGGATTCTTGTCCACTTGGTTGATCGCTTTGGGCTTGGAAAATGGTCCAAGATTGCTAAGTATATGAATGTTGCAGCTCAAGAAATTCATGGACGCCATGGATATTCGAGATCGTGA 579 0.4059 MVPSSRDSIYVNPTPSYMISHNNGSQRELLSARNQMIFAPNSNKIESTNGRLNTSKGIWDLSKKNIFEYGETTQHQVSPALSPLPVYDAYLSLSVKPEIEGDLSSNGCIGNIPRENDQGHVPSVRMRHERIQKNSEIQSKDLNIIKGQWTANEDRILVHLVDRFGLGKWSKIAKYMNVAAQEIHGRHGYSRS* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1206 192 CDD SANT 149 177 IPR001005 -
Mal3g1206 192 Gene3D - 138 189 - -
Mal3g1206 192 SUPERFAMILY Homeodomain-like 141 177 IPR009057 -
Mal3g1206 192 Pfam Myb-like DNA-binding domain 146 177 IPR001005 -
Mal3g1206 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 176 IPR017930 -
Mal3g1206 192 ProSiteProfiles Myb-like domain profile. 141 192 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1206 Mal-Chr3 51161868 51163806 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1206 138 176 MYB Transcription Factor Family AT4G18770 51.282 4.38e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g1206 Myb_DNA-binding 1.5e-07 CL0123