Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1205 ATGGAACTAGATCCCAGTTTTGCAGAAAATATTCCTTATTTTTCTAGGGATTTTCCTAAAAAACCTTGCATAAAATCAGAGATCCCCACAATGGTTCTCTCTCAACTAAGGTCAACTATTTCACCTCCACCGTCACATTACACCAGCTATTTGTGCCAAAATCCTTGCAATCAATTTAAGGAGCATCCTTTGAATGGGTCTGACCATCAATCTAGGTTTTGTACAATGGTTCCTTCATCTAGAGACTCAATTTATGTGAACCCAACCCCTTCATACATGATTTCACACAACAATGGGTTCCAGAGAGAACTTCTCAGTGCTCGAAATCCAATGATCTTTGCTCCAAACACAAAGGAATTTGGGATTTGTCCAAAAAAAAATATCTTTGAATATGGTGAAACTTCACAACATCAGGTCAGTCCCGCTCTATCACAACTACCAGTTTATGATGCACATCTATCTTTGTCAGTTAAACCTGAAATTGAAGGTGATCTTTCTTCCAATGGTTGTATTGGAAACATACCCCGAGAAAATGATCAAGGACTTGTTCCTAGTGTACGGATGCGGTATGAAAGGATTCAGAAGAATATTGAGATTCAAAGCAAGGATCTCAATATAATCAAAGGCCAATGGACTGCAAATGAGGACAGGATTCTTGTCCACTTGGTTGATCGCTTTGGGCTTGGAAAATGGTCCAAGATTGCTAAGTATATGAATGGTAGGATTGGCAAACAGTGCAGGGAGAGATGGAATAACCATCTTTGTCCAGACATTAAGCGGAAGGAGTCATGGACTGAAGAGGAGGACATGATATTGATTGAAGCTCACAAGATAGTTGGAAACAAGTGGGCTGAAATAGCAAGGAGATTGCCAGGGCGCACTGAGAACTCTGTTAAGAACCACTGGAATGCCACCAAGCGTCGCCAGAACGCTAAGAGGAAGAACCGGGGTAAAAGTTCAAAAAGTTCACTACTTCTGAAATACATAATGGAAGTCACTTCGACTAAGGAAGTTGAAAATAAGTTGATGAAGAATTCATTAAGCATGATGAATTTAGGGAATCATTCAAATTTTGAAAGTTCTCAAAGTGATTTTAGCTCTGAAGGTTTGACTACTTCAAAGGAAGAAATTGATGGCTATGTGCCAATGATGTTCAATGGTGATGATGGAATGGCAAGTGGATCTGGTACCACAATGAATAATGAGTTTGGATCATATGGAATGAAGTTTTTTTTTCTGAGATTCCTATGA 1251 0.3925 MELDPSFAENIPYFSRDFPKKPCIKSEIPTMVLSQLRSTISPPPSHYTSYLCQNPCNQFKEHPLNGSDHQSRFCTMVPSSRDSIYVNPTPSYMISHNNGFQRELLSARNPMIFAPNTKEFGICPKKNIFEYGETSQHQVSPALSQLPVYDAHLSLSVKPEIEGDLSSNGCIGNIPRENDQGLVPSVRMRYERIQKNIEIQSKDLNIIKGQWTANEDRILVHLVDRFGLGKWSKIAKYMNGRIGKQCRERWNNHLCPDIKRKESWTEEEDMILIEAHKIVGNKWAEIARRLPGRTENSVKNHWNATKRRQNAKRKNRGKSSKSSLLLKYIMEVTSTKEVENKLMKNSLSMMNLGNHSNFESSQSDFSSEGLTTSKEEIDGYVPMMFNGDDGMASGSGTTMNNEFGSYGMKFFFLRFL* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1205 416 SUPERFAMILY Homeodomain-like 205 302 IPR009057 -
Mal3g1205 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 310 IPR017930 -
Mal3g1205 416 Gene3D - 262 327 - -
Mal3g1205 416 PANTHER MYB PROTEIN-RELATED 189 352 - -
Mal3g1205 416 Gene3D - 207 259 - -
Mal3g1205 416 Pfam Myb-like DNA-binding domain 261 303 IPR001005 -
Mal3g1205 416 Pfam Myb-like DNA-binding domain 208 254 IPR001005 -
Mal3g1205 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 203 258 IPR017930 -
Mal3g1205 416 CDD SANT 263 306 IPR001005 -
Mal3g1205 416 CDD SANT 211 254 IPR001005 -
Mal3g1205 416 ProSiteProfiles SANT domain profile. 259 310 IPR017884 -
Mal3g1205 416 PANTHER MYB DOMAIN PROTEIN 100-RELATED 189 352 - -
Mal3g1205 416 ProSiteProfiles Myb-like domain profile. 203 254 IPR001005 -
Mal3g1205 416 ProSiteProfiles Myb-like domain profile. 260 306 IPR001005 -
Mal3g1205 416 SMART sant 260 308 IPR001005 -
Mal3g1205 416 SMART sant 207 256 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1205 Mal-Chr3 51143808 51146107 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1205 200 329 MYB Transcription Factor Family AT4G18770 67.692 3.48e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mal3g1205 Myb_DNA-binding 3.9e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1205 K09422 - mtr:MTR_4g088015 499.975