Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1203 ATGGGAACCTTCCTCAACTTAATTATAATTAATAAAATATCTAATCCACGCATATATTGTTTGGTATTATTGCAGAAAGACTCATGGAGTGAAGAGGAAGAGAAAATATTTATCGAAGCTCACAAGATAGTTGGGAACAAGTGGGCTGAAATTGCTAGTAGACTTCCTGGACGCACTGAGAACTCCATCAAGAACCGCTGGAACTCCACTAAGCGCAGCCTAAATGCTACAAAAAGGCCTAACCGACGAAATGGTTTGAAAGGAACACTACTTCATAAATACATCAGCGAAATCGCTGATTCTAAGGATGTTCGGAACAAGCCTGAGAATACCAACATGATGAATTTTGGGTGTCAGACAAATTTCAACATTACCAATACCAACGTTGGTCTTAGTCATGGTCGATATGAAATTTCAGAGAGTGTTTTTAGCTTTGAAGGTTTGGCTACTCCAACAGAAGAACTTGGTGGCAATATGGAAATGATGCTCAATGGTGATGATGGAATGGCAAGTGGCTCTGGCACGATGAACTATGAGTTTGAATCGTAA 549 0.3971 MGTFLNLIIINKISNPRIYCLVLLQKDSWSEEEEKIFIEAHKIVGNKWAEIASRLPGRTENSIKNRWNSTKRSLNATKRPNRRNGLKGTLLHKYISEIADSKDVRNKPENTNMMNFGCQTNFNITNTNVGLSHGRYEISESVFSFEGLATPTEELGGNMEMMLNGDDGMASGSGTMNYEFES* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1203 182 PANTHER MYB PROTEIN-RELATED 26 107 - -
Mal3g1203 182 SMART sant 25 73 IPR001005 -
Mal3g1203 182 ProSiteProfiles SANT domain profile. 24 75 IPR017884 -
Mal3g1203 182 SUPERFAMILY Homeodomain-like 25 74 IPR009057 -
Mal3g1203 182 Gene3D - 28 94 - -
Mal3g1203 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 24 75 IPR017930 -
Mal3g1203 182 CDD SANT 28 71 IPR001005 -
Mal3g1203 182 Pfam Myb-like DNA-binding domain 26 69 IPR001005 -
Mal3g1203 182 ProSiteProfiles Myb-like domain profile. 24 71 IPR001005 -
Mal3g1203 182 PANTHER TRANSCRIPTION FACTOR MYB98 26 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1203 Mal-Chr3 51093403 51093951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1203 24 98 MYB Transcription Factor Family AT4G18770 56.000 7.70e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g1203 Myb_DNA-binding 2.4e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1203 K09422 - mtr:MTR_7g035350 228.024