Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1202 ATGCCAAACATGACTCTGACCAACGTTGTTCGGCTTCTTTTTAGCGTTTATGATCCACTTAGTGGAGTTCCACCGGTTCTTGATGGACCTCTCGTTGCGTCTAGGAAGTCTACTAGCAATTTCAGCCCACTTGTTACAAAATATCTTAAAGAGTCATGGAGTGAAGAAGAAGCCAAATTATTTTTCGAAGCTCACAAGATATTCGGTAACAAGTGGGCTGAATTTTCTAGTAGACTTCCTAGACGCAGCGAGAACGAAATCTCTGATTCTAAGGATGTTCAAAACAAGCCAAAGAATTCTACCAACATGATGAATATTGTTTATTTTAAAAACTTCGACAATACTAATACCAACGTTGGTCATAGTCATGTTTGGCACGAAATTTCAGACATTGTTTTTAGCTCTGAAGGTTTCGGTACTCAAGTGGAAAAACTAGGTGACAATGTTGCAATGATGCTCAATGGTGATGACGAAATGGCAAGTGGATCTGGCACGATGAATTATGAGTTTGGATCGTATGGAATAGAGTTTTTTTTCCTAAGTTTTTACCTCATGGAGATTATCTATAGAAACTCTTAG 579 0.3834 MPNMTLTNVVRLLFSVYDPLSGVPPVLDGPLVASRKSTSNFSPLVTKYLKESWSEEEAKLFFEAHKIFGNKWAEFSSRLPRRSENEISDSKDVQNKPKNSTNMMNIVYFKNFDNTNTNVGHSHVWHEISDIVFSSEGFGTQVEKLGDNVAMMLNGDDEMASGSGTMNYEFGSYGIEFFFLSFYLMEIIYRNS* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1202 192 CDD SANT 52 87 IPR001005 -
Mal3g1202 192 Gene3D - 52 90 - -
Mal3g1202 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 50 87 IPR017930 -
Mal3g1202 192 Pfam Myb-like DNA-binding domain 50 87 IPR001005 -
Mal3g1202 192 SMART sant 49 97 IPR001005 -
Mal3g1202 192 ProSiteProfiles Myb-like domain profile. 50 86 IPR001005 -
Mal3g1202 192 SUPERFAMILY Homeodomain-like 44 87 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1202 Mal-Chr3 51024781 51025961 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1202 50 102 MYB Transcription Factor Family AT2G25230 43.103 2.80e-09 53.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal3g1202 Myb_DNA-binding 9.2e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1202 - - mtr:MTR_7g035350 131.339