Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1162 ATGTATATTCACAGAAAAAAAAAGTCTTGTGCAGCCCGCACACATCAAAGAAGAAAGTGTTCTCCAGATTACCCCTTAGCTCCTTATTTTCCGGCCGACAAACCAGATATGTTCGCCAATGCTTATCGTTTGTTTGGTATTTCCAACATGATGAAGATACTAAAGAGTATTCATGATGATCGTGTTAAAGATGATGCAATGAAGTCAATTATTTTTGAGTCGGATACGCGTGCAAGATTCCCAATTCATGGATGTGTTGGTGTTATTATGGCCATGGGGTATCAAGGTAAGATAAATGAGTCTATGGAAGAGTTAGATCATGTAAAACAGTTACTAAGTTTGTGTAAGCAAAATCTTCTACATTCCTTTTCATTGGATCATTCTTCAGTACCTTCTACGAGTTCTCCAATTCCAATATTTAACAATGTTGGTAATGTTCCTTATTATAATAATCACAATAGTGAAAATAATAATGATATTATGATGAAAGCATCTTCTTCTTATGTTAGTAACATCATCCCTCATGATGTAAACAATACTCAAGTTCTTGGAAGTCTTGATGTTAATATGGAGTATCAAGGTATGATAAAGAAGTATGAAGAAGGAAAAACTGGTAATAGCAATAGTGGTAACATAAGGAAAATCTGGTGA 651 0.3425 MYIHRKKKSCAARTHQRRKCSPDYPLAPYFPADKPDMFANAYRLFGISNMMKILKSIHDDRVKDDAMKSIIFESDTRARFPIHGCVGVIMAMGYQGKINESMEELDHVKQLLSLCKQNLLHSFSLDHSSVPSTSSPIPIFNNVGNVPYYNNHNSENNNDIMMKASSSYVSNIIPHDVNNTQVLGSLDVNMEYQGMIKKYEEGKTGNSNSGNIRKIW* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1162 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 187 - -
Mal3g1162 216 ProSiteProfiles LOB domain profile. 8 112 IPR004883 -
Mal3g1162 216 Pfam Lateral organ boundaries (LOB) domain 9 108 IPR004883 -
Mal3g1162 216 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1162 Mal-Chr3 48324590 48325240 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1162 9 114 AS2 family AT3G47870 49.057 5.78e-29 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal3g1162 LOB 2.6e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1162 - - mtr:MTR_6g011200 177.178