Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1150 ATGAACAACTTCTTCTGCGAATCAATGATGACAATGGTGAAGGTTACTCCAATATCAGACATTGTATGTGGTAAGCTTGAGTTTTATGTGAGGGCTAGAGTCATTCATCTTTGGTCAATTCCTGATCGTAACAATGCCTCTGAAGAAGGAAGCATCCAAATGCTTTTGCTGGATGATAAGTGTGGAAAGATTCAAGCAAGCATCATAAAAAATTTGATTCCAAAGTTTAAGAGTGAAATAGAAGAAGGTTCAGCTTATGCCTTTGAAAATTTTATGGTTGCTAGGAATGATCCGTCCTACAAGGCTACTGAACACAAATATAAGCTCAATTTCATGCATTCAACTAAGGTTTTCAAAATCACAACTACAGATATACCTACATGTCATTTTGATTTTCTGCCTTTCCCATCAATATTGGCCGCTACTAGAGAGGACAAGTTGCTTGATATTATTGGACATGTTGTTGGAAAGGACGTTGTGAAAGAAACCGATAAAAACGGTAAAAAGAGTAAGGTCATGGATTTGACTATTGAGGATTTAGAAAGTAATAAAATACATTGCACTTTGTGGGATCAATATGCTGAAAAGATGCAGCTATTTCTGGAAACCCATGATTCTACAAAATCTGTGATTATCATAATGCAACTTTGCAAGTTCAAGAAATATTTTGGAGTAATGGGTGTATCAAACACTTTCTATGGAACCAAAATGTTGTTGAATGCTGATTTCCCAGTTGTTGCTGAATATAAATCACAACTCGATGGGACAGACCTTGAACTAACTCCAATTGTTAGTCAAATCAGTGGGCCTGCAGTACCCTCGCTATCTGATGATTTGCTTAAGACGCGGAGGATGACTATTGAGGATTTAATCGAAGCAACTGAGGCATCTCTTTGGTGA 900 0.3711 MNNFFCESMMTMVKVTPISDIVCGKLEFYVRARVIHLWSIPDRNNASEEGSIQMLLLDDKCGKIQASIIKNLIPKFKSEIEEGSAYAFENFMVARNDPSYKATEHKYKLNFMHSTKVFKITTTDIPTCHFDFLPFPSILAATREDKLLDIIGHVVGKDVVKETDKNGKKSKVMDLTIEDLESNKIHCTLWDQYAEKMQLFLETHDSTKSVIIIMQLCKFKKYFGVMGVSNTFYGTKMLLNADFPVVAEYKSQLDGTDLELTPIVSQISGPAVPSLSDDLLKTRRMTIEDLIEATEASLW* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1150 299 SUPERFAMILY Nucleic acid-binding proteins 129 254 IPR012340 -
Mal3g1150 299 SUPERFAMILY Nucleic acid-binding proteins 13 120 IPR012340 -
Mal3g1150 299 Gene3D - 13 119 IPR012340 -
Mal3g1150 299 PANTHER REPLICATION FACTOR A 1, RFA1 20 289 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Mal3g1150 299 CDD RPA1_DBD_B_like 149 254 - -
Mal3g1150 299 Gene3D - 123 259 IPR012340 -
Mal3g1150 299 CDD RPA1_DBD_A_like 30 117 - -
Mal3g1150 299 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 20 289 - -
Mal3g1150 299 Pfam Domain of unknown function DUF223 54 143 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1150 Mal-Chr3 48022893 48025676 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1150 13 254 Core DNA Replication Machinery Family AT2G06510 23.387 4.47e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1150 - - mtr:MTR_1g105785 330.872