Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1110 ATGGCCGCTCCAAATCAAATAACCTTCAAATTCTCAACACTATTAATTATACTACTTGCATTTGAGGTCAGAGAGGCTATAGCTTTTTATGGTAGAGTAACAATTACAATTATCAATCAATTACAGGCACCAACTCCCTCAACTTTATTTTTTAATTGCAAATCCAAAGACAACGATCTTGGATTTCATACACTCCAATATGGAGGAAGTTACAAGTTTTCATTTAAGCCAATATTGTTTCCTAGTTTTAAAAATACGTTATTCTTCTGCAGTTTTGGATGGCCTAATGACCGTCGCCGTCATTATATTGACATATATGATCAACAACGAGAGAATTGTAGAAATTGTGTTTGGAAAATAGGTATAGGTGGAGGTTGTGAGAACAACCTTTGTTATCGTTGGAAAAGTATCCAATAA 417 0.3405 MAAPNQITFKFSTLLIILLAFEVREAIAFYGRVTITIINQLQAPTPSTLFFNCKSKDNDLGFHTLQYGGSYKFSFKPILFPSFKNTLFFCSFGWPNDRRRHYIDIYDQQRENCRNCVWKIGIGGGCENNLCYRWKSIQ* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1110 138 PANTHER S-PROTEIN HOMOLOG 18-RELATED 8 134 - -
Mal3g1110 138 Pfam Plant self-incompatibility protein S1 34 134 IPR010264 -
Mal3g1110 138 PANTHER - 8 134 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1110 Mal-Chr3 45171323 45171739 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1110 32 136 Carbohydrate Esterase AT3G16970 38.136 7.53e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1110 - - mtr:MTR_0007s0440 157.147