Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1081 ATGGATTCACTTGTTGATGGAGTTGATTCCTTACCTGAGGTTCAGAAATCAGTTTCTGGCATAGATCACAATCCTCCTTCGACATCTCGGCCACCTTTGAGAGCATATCAAGGGCCTTCTTCCAATCATCACAATCAAGCAAGGATGAAGGATACCTATCAGGAAGCTAACAATGTCGAGCATGAAGGTTCATCTAAAATGGAGAAGCAATATTATAACCCTAATGTTAAATCTGACTATGCCAGCCATACCGAAACTTTTGAAAGTTGTTTGGTAAAGAATATTTCCACAATTGAAACAAAATTGTGCATCAGCCAACCATTTGACGATTCTGCGGATCACAGTTCCGGAGACATATTAGAATCGGACAATGGCATATTGGGTTCATCGATAGGAGTTGTTGATCAGAAAAACTCGGAGATTACATTTTGCTCAAGTCCTCAGAGTAGTTTATATTCTACCACTGACTTTTTAGAAGCCAAAGAAAGTTTCACCAACACTGGAATCAATGAATGTGTTAGTGTCGATAAGTCAGTTGAAAGTGGAGAGGTTACAAATTCAGGTGAGAGCAGGAAGACGAGCATCTGTAGAGGGAGTACCGGAAGTGATGTTAGCGATGAAAGCAGCATCAGTAGCTTGAGTAGTTCTTTGTATAAACCTCACAAGGCAAATGATGTAAGATGGGAAGCAATTCAAGCGATCCGAGTTCGTGATGGGGGATTGGAAATGAGACATTTTAGGTTGTTGAAAAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCAGAGTTAAGCAGTACAAGGACTTGTTTCGCCATGAAAGTAATGAACAAGACGGAACTGTCGAGTCGCAAGAAGCTTCCAAGGGCGCAGACTGAGAGAGAGATATTGCAGTCTCTAGATCATCCATTTTTACCTTCCTTGTACACTCACTTTGAGACAGAATCATTCTCTTGCTTGGTTATGGAGTTTTGTCCTGGTGGGGATCTTCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAACATGCTGCAAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGAATCATCTACAGAGACCTTAAACCCGAGAACGTGTTGGTGAGAGAAGATGGTCACATAATGCTCTCAGATTTTGATCTTTCTCTAAGATGTGCCGTTAGTCCAACTCTCGTAAAGTCCTCAAACTTTAACTTAGAGACAAAAAGCTCAGGATACTGCGCTCAGCCCGCTTGCATTGAACCAACTTGCGTAATTAAGGCGGACTGCATCCAACCTTCATGCTTCACGCCACGTTTTCTATCAGGCAAATCGAAGAAGAAAGAAAAGAAGTTGAAACCTAAAAATGATGTGCATAATCAGGTGACACCTCTCCCTGAGCTTATGGCCGAGCCCACAAATGCCCGATCAATGTCCTTTGTTGGCACGCATGAGTACTTGGCGCCTGAAATCATCAAAGGTGAAGGTCATGGCAGTGCTGTCGACTGGTGGACATTTGGTATATTCTTATACGAGCTTTTGTTTGGTAGAACGCCATTCAAAGGTTCGGCGAATCGGGCAACTTTATTTAATGTAGTTGGGCAGCCCTTAAGATTTCCAGAATCCCCTAGTGTCAGCTTTGCTGCAAGGGACTTGATTAGGGGTTTACTTGTGAAAGAGCCTCAGCATCGTCTTGCGTACAGACGTGGAGCTACAGAGATAAAACAACATCCATTCTTTCAAAATATTAACTGGGCGCTGATCCGTTGCGCAACTCCTCCAGAAGTGCCGAGACAGGCCATGAAAGCAGCACTCACACCCGAGAAGAAGGCTCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1893 0.4311 MDSLVDGVDSLPEVQKSVSGIDHNPPSTSRPPLRAYQGPSSNHHNQARMKDTYQEANNVEHEGSSKMEKQYYNPNVKSDYASHTETFESCLVKNISTIETKLCISQPFDDSADHSSGDILESDNGILGSSIGVVDQKNSEITFCSSPQSSLYSTTDFLEAKESFTNTGINECVSVDKSVESGEVTNSGESRKTSICRGSTGSDVSDESSISSLSSSLYKPHKANDVRWEAIQAIRVRDGGLEMRHFRLLKKLGCGDIGSVYLAELSSTRTCFAMKVMNKTELSSRKKLPRAQTEREILQSLDHPFLPSLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNFNLETKSSGYCAQPACIEPTCVIKADCIQPSCFTPRFLSGKSKKKEKKLKPKNDVHNQVTPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQAMKAALTPEKKAPGVKPSGNYLDIDFF* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1081 630 CDD STKc_phototropin_like 244 604 - -
Mal3g1081 630 ProSiteProfiles Protein kinase domain profile. 246 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1081 630 PANTHER FLIPPASE KINASE 1-RELATED 42 630 - -
Mal3g1081 630 MobiDBLite consensus disorder prediction 183 210 - -
Mal3g1081 630 Gene3D Transferase(Phosphotransferase) domain 1 478 602 - -
Mal3g1081 630 ProSitePatterns Serine/Threonine protein kinases active-site signature. 367 379 IPR008271 GO:0004672|GO:0006468
Mal3g1081 630 SMART serkin_6 246 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1081 630 MobiDBLite consensus disorder prediction 1 45 - -
Mal3g1081 630 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 42 630 - -
Mal3g1081 630 Gene3D Phosphorylase Kinase; domain 1 244 329 - -
Mal3g1081 630 Gene3D Transferase(Phosphotransferase) domain 1 330 399 - -
Mal3g1081 630 MobiDBLite consensus disorder prediction 20 45 - -
Mal3g1081 630 Pfam Protein kinase domain 481 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1081 630 Pfam Protein kinase domain 247 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g1081 630 SUPERFAMILY Protein kinase-like (PK-like) 220 604 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1081 Mal-Chr3 43568231 43570725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1081 189 630 AGC Kinase Gene Family AT5G47750 74.781 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal3g1081 Pkinase 2.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1081 K08286 - gmx:100802402 967.607