Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1066 ATGTCTTCCTCCTACTCCTCCATTTCAAATACACTTTCTTTCCACAAATTCCACAACAAACCCCAAACCCCTTTTCTCTTCTCCAGGAGGAGGACCGTTAAAATCCGTATCGCTTCAGATGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTACCTTCCACAACATTCTCGCCAAACGGCTCGGGTACGCTGCCTCCATTTTACCCGGAGGCCATTGGTGGACGTTACCCAAACATCCGGAAGATGACAGCGCTGAACCCACGGCCGTATTGCTCGCTCTCCGACGAATGTGGGACCTTGTTGCCGATCAGCGATGGGTTGCACTTCTGGCGTTCACCTCCCTTGTAATTGCTGCTCTTTCAGAAATCACCATGCCCAGTATATTAGCAGCATCAATATTTTCAGCACAGAGTGGTGAGACCGCGGCATTCTCTAGGAATGCAATGTTCTTGGTTCTTCTGTGTTTCACTTCAGGGATATGCAGTGGTTTGCGAAGTGGTTGCTTTGGAATTTTGAATGTAACCTTGTTAAAGCGTCTTCGAGAAAACTTGTATGCAGCCATTCTTTTTCAGGACATATCCTATTTTGATAAAGAAAAAGTTGGTACCTTGACAAGCCGGCTTGCAGCAGATTGTCAACGGCTTTCGCATGTTGTAGGAAATGATCTTCAGTTGATATTACGCAACACTTTGCAGGGATCAGGAGCAATTATTAATTTACTGGCTTTATCTTGGCCTCTAGCATTATCTGCATTGATGATTTGTTCTGTGTTATCTGCAATTTTCCTGGTTTATGGCAGGTATCAAAGAAAAGCAGCAAAGTTAACACAAGATTTCACAGCTTGTGCCAACGACGTGGCTCAGGAGACACTTTCTTTGATAAGAACTGTCCGAGTGTATGGAACCGGAAAAGAAGAATTTGAAAGGTACAATCAGTGGCTACAGAAATTAGCATTTATTAGCGGTAGAGAGAGTGTGGGTAATGGTTTATGGAACCTGAGCTTTAATACCCTTTACCGGTCAACTCAGATATTTGCAGTACTTTTAGGAGGAATGTCTGTTCTCAGTTGTTGTGTCACTGTTGAGCAACTTACTAAATATGTATTATACTGTGAGTGGTTGATTTATGCTACTTGGAGGGTGACAAACAGCTTATCATCATTACTGCATTCCATTGGAGCATCTGAACAAGTTTTCCAGCTGATGAATCTTTTGCCCTGTGACCAGTTCTTAACCAAAGGAATTAAGTTGCAGAAGTTAGTAGGCCATATTCAGTTTGTAAATGTATCATTTCATTATCCTGCAAGGAGTATGATGCTTGTTCTAGAACACTTAAACTTCTCTGTGAAAGCAAATCAAGTCATCGCCATTGTTGGTCTTAGTGGTAGTGGAAAGAGCACATTAGTCAACCTTTTACTTCGTCTCTATGAGCCTAGTAGCGGTCAGATATTTATTGATGGTATCCCTCTTAAGGAGTTGGATATCAGGTGGCTGAGGCAGAACATTGGATGTGTTGCGCAGGAACCCCATATCTTTCACATGGATATAAAGTCGAACATAAAATATGGTTGCCCTAGGAACATAAATCAAGAAGATATTATAAAGGCAGCAAAATTGGCTTATGCCCACGACTTTATTTCTTCACTTCCTAATGGCTACGACACCCTTGTTGATGACAATGCACTTAGTGGTGGACAAAAGCAGCGAATTGCCATTGCCAGGGCTATTCTTAGGGACCCAGTTATTATGATCCTTGACGAACCAACCAGTGCCTTGGATTCTGAAAGTGAGCATTACATCAAGGAGGTATTGTGTGCATTCAAAAATGAACCTAAATCAAGAACAATCATTATCATAGCACATAGGCTTTCTACTGTAAAAGCTGCTGACGCGATCATTGTTATGGATAATGGTTGCATTAGTGAGATCGGTAACCATGAAGAGCTTCTGGTCAAGGATGGGCTCTATGCAAAGTTAAATAAAATTCAAGCAGATATTTTAACTTGA 2019 0.416 MSSSYSSISNTLSFHKFHNKPQTPFLFSRRRTVKIRIASDDSSSSSSSSSSSSSSTFHNILAKRLGYAASILPGGHWWTLPKHPEDDSAEPTAVLLALRRMWDLVADQRWVALLAFTSLVIAALSEITMPSILAASIFSAQSGETAAFSRNAMFLVLLCFTSGICSGLRSGCFGILNVTLLKRLRENLYAAILFQDISYFDKEKVGTLTSRLAADCQRLSHVVGNDLQLILRNTLQGSGAIINLLALSWPLALSALMICSVLSAIFLVYGRYQRKAAKLTQDFTACANDVAQETLSLIRTVRVYGTGKEEFERYNQWLQKLAFISGRESVGNGLWNLSFNTLYRSTQIFAVLLGGMSVLSCCVTVEQLTKYVLYCEWLIYATWRVTNSLSSLLHSIGASEQVFQLMNLLPCDQFLTKGIKLQKLVGHIQFVNVSFHYPARSMMLVLEHLNFSVKANQVIAIVGLSGSGKSTLVNLLLRLYEPSSGQIFIDGIPLKELDIRWLRQNIGCVAQEPHIFHMDIKSNIKYGCPRNINQEDIIKAAKLAYAHDFISSLPNGYDTLVDDNALSGGQKQRIAIARAILRDPVIMILDEPTSALDSESEHYIKEVLCAFKNEPKSRTIIIIAHRLSTVKAADAIIVMDNGCISEIGNHEELLVKDGLYAKLNKIQADILT* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1066 672 Pfam ABC transporter transmembrane region 114 375 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g1066 672 Gene3D - 418 670 IPR027417 -
Mal3g1066 672 Gene3D ABC transporter type 1, transmembrane domain 94 411 IPR036640 GO:0005524|GO:0016021
Mal3g1066 672 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 113 360 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Mal3g1066 672 PANTHER ATP-BINDING ABC TRANSPORTER 53 671 - -
Mal3g1066 672 SMART AAA_5 455 643 IPR003593 -
Mal3g1066 672 PANTHER ABC TRANSPORTER B FAMILY 53 671 - -
Mal3g1066 672 ProSitePatterns ABC transporters family signature. 566 580 IPR017871 GO:0005524
Mal3g1066 672 CDD ABC_6TM_TAP 115 402 - -
Mal3g1066 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 667 IPR027417 -
Mal3g1066 672 Pfam ABC transporter 446 594 IPR003439 GO:0005524
Mal3g1066 672 SUPERFAMILY ABC transporter transmembrane region 99 412 IPR036640 GO:0005524|GO:0016021
Mal3g1066 672 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 428 666 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1066 Mal-Chr3 43168587 43184710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1066 183 667 Calmodulin-binding Proteins AT2G36910 35.067 4.63e-77 266