Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1052 ATGAGCATAGGTGCTGTGCTTGATTTGGCTTCATTAATGGGAAAGCATCAGAAGATAGCAATGGAAATTGCAGTGGAAGAATTTAACAATCAATTTAGTTCTTCCAAGATGGATTTGCAGATAAAAGATTCACATGGAAATTCTGCTCATGTAATTGCAAGAAGTAATAACATTCCTATCATGTCTCTAACTTCATTTGCAGCCAAACCAGAATTATTATCTCCTAGATTGCCACATTTCATTCAAGTAGGGGATGATATAAACCTTCACATGCAATGCATTGCAGCAATTGTAGGAGAATTCAAATGGAAAAAGGTGATAGTAATTTATGAACTTAATAATGACTTTTCATCTGATCCAGGAATACTACTTAGCCTCTCTTATTCACTTAGACTTGTTGGTTCTGAGATTGAAAATCATTTAGCTTTTCCTTCCTTATCAACTCTTTCAGACCCAAAATCTAAAATTGAAAAAGAGCTTAATAACTTGAAAAATAAGAATAATAGGGTCTTCTTGATTGTTCATTCTTCTTTAGAGCTAGCTAACATGCTTTGCAAAAAAGCAAAACAAATAGGTTTGATGGAAAAAGGTTCTGCATGGATTATGCCAAATGAAGTTGCTGGCCTTCTTGACTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAAAACACATTTCATGGAAATGAATGAGACCTTTAGAAAATTTAAATTCAAATTCCAAAGAAAGTTTGCACTAGAATACCCTGAAGAAGATAACATTAACCCAAGTATCTTTGCACTTCAAGCATATGATGCAACTAAAGCTATGGTTGAGGCTGCAAAACAATCATCACAAGGAAAGTTCAGCCTTGAACAATTCTCAGAAAATGGACAACTTCTCCAATCACCAACCTTCAACATAATTAATGTGATTGGAAAAAGTTATAGAGAAATGGCATTTTGGTCTTCAACACTTGGTTTTTCCAAGAACATTGACAGACATCAAGTAATGGAGATGAACACAAATAATAGTTCTAATGGAGTTTTCAGAACAGCTCATTGGCCTGGAGATATGCTTTCAGTTCCTAAGGGATTGACTCACAGTAATGAGGAAAGGTCGTTGAAAATAGGAAGCAACAATGAAACTTCTATTACTGGTTTGTTTAAAGCAGCTGTCAAACTTTTACCTTATGATTTACAATACAAGTTTGTTCCCTTCAATGGCTCCTACGATAAAATGGTTGATCATGTCTACAATAAGGTATGGTAA 1266 0.3452 MSIGAVLDLASLMGKHQKIAMEIAVEEFNNQFSSSKMDLQIKDSHGNSAHVIARSNNIPIMSLTSFAAKPELLSPRLPHFIQVGDDINLHMQCIAAIVGEFKWKKVIVIYELNNDFSSDPGILLSLSYSLRLVGSEIENHLAFPSLSTLSDPKSKIEKELNNLKNKNNRVFLIVHSSLELANMLCKKAKQIGLMEKGSAWIMPNEVAGLLDSVNSSVIFNMQGVVGFKTHFMEMNETFRKFKFKFQRKFALEYPEEDNINPSIFALQAYDATKAMVEAAKQSSQGKFSLEQFSENGQLLQSPTFNIINVIGKSYREMAFWSSTLGFSKNIDRHQVMEMNTNNSSNGVFRTAHWPGDMLSVPKGLTHSNEERSLKIGSNNETSITGLFKAAVKLLPYDLQYKFVPFNGSYDKMVDHVYNKVW* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1052 421 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 2 418 - -
Mal3g1052 421 PANTHER GLUTAMATE RECEPTOR 2 418 - -
Mal3g1052 421 Pfam Receptor family ligand binding region 49 294 IPR001828 -
Mal3g1052 421 Gene3D - 87 260 - -
Mal3g1052 421 SUPERFAMILY Periplasmic binding protein-like I 3 322 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1052 Mal-Chr3 42603932 42611457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1052 52 417 Ion Channels AT2G24710 26.389 1.29e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1052 - - mtr:MTR_5g059920 598.971