Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1051 ATGAAAAGGAATTCTTCATCGCAGCTCAGTATCTGTTTCATTGTTATGCACTTGTTAGCATGGTCAAGGGTGCAAAGAGGTTATTCCTTAGTGCCAGAAAGAACCAATAATATGAGTATAGGTGCTGTGCTTGATTTGGCTTCATTAATGGGAAAGCATCAGAAGATAGCAATGGAAATTGCAGTGGATGAATTTAACAATCGATTTAGTTCTTCCAAGATGGATTTGCATATAAAAGATTCACATGGAAATTCTGCTCAAGTAATTGCAACTGTTATGGATTTCTCACAAAGGAACCAAGTGCATGCCATCATAGGAACTATCACACACAATGAAGCAATACTGGCAAGTGAATTTAGTAACACCATAAAGAACATTCCTATCATGTCTCTAACTTCATTTGCAGCCAAACCAGAATTATTATCTTCAAAATTGCCACATTTCATTCAAGTAAGGGATGATATAAACCTTCACATGAAATGCATTGCAGCAATTGTTGGAGAATTCAAATGGAAAAAGGTGACAGTAATTTATGAACTTAATAATGACTTTTCATCTGATCCAGGAATACTACTTAGCCTCTCTTATTCACTTAGACTTGTTGGTTCTGAGATTGATAACCATTTAGCTTTTCCTTCCTTATCAACTCTTTCAGACCCAAAATCTAAAATTGAAAAAGAGCTTAATAACTTGAAAAAGAAGAATAATAGGGTCTTCTTGATTGTTCATTCTTCATTAGAGCTAGCTAACATGCTTTGTGAAAAAGCAAAACAAATAGGTTTGATGGAAAAAGGTTCTGCATGGATTATGCCAAATGAAGTTGCTGGCCTTCTTGACTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAAAACACACTTCATGGAAATGAATGAAACCTTTAGAAAATTTAAATTCAAATTCCAAAGAAAGCTTGCACTAGAATACCCTGAAGAAGATAACATTAACCCAAGTATCTTTGCACTTCAAGCATATGATGCAACTAAAGCTATGGTTGTGGCTGCAAATAAATCATCACAAGGAAAGTTAGGACTTGAAAAATTCTCAGAAACAATTTTGTCAAAGAATGGACTATTGCTGGAATCACCAACCTTCAACATAATTAATGTGATAGGGAAAAGTTATAGAGAAATGGCATTTTGGTCTCCAACACTTGGTTTTTCCAAGAACATTGTTGGCCAAAATAAGGTAATGGAGATAAATACAAATAATGATGATTCTAATGGAGTTTTCAAAACAGTTTATTGGCCTGGAGAATTATTATCGGTTCCGAAGGGTCACAATCATGAGGAAAGGTTTTTGAGAATAGGAATACCTTCCAATGGTGCTTTTTCTCAGTTTGTGAATGTTGAATATGATCAGACCAAGAATGAAACTTTCGTCTCTGGTTTCTCAATCGATGTCTTTAAAGCAGCTGTCAAACGCTTACCTTATTATCTAAATTACACGTTTTCTCCCTTTGGAGGCTCCTACGATGAAATGGTTGATCAAGTCTACAATAAGACCTTGGATGCTGCTGTTGGTGATACATCAATAGTTGCATATAGATACCATTTAGTGGACTTCTCACAACCTTATGTTGAATCTGGCCTCCACATGGTGGTTACTGAACAACCGGCGAAATCAAAAGAAACATGGATGTTTTTGCATGCCTTTAAAAAAGAGATGTGGCTGATGATGATAGCTATGCATGTATTTGTGGGATTTGTTATTTGGTTGATTGAAAAAGAAGATAATGAAGATCTAAGGGGATTAGGGTCCATGCTTTGGTTTTTAGTCACTGTACTATTTTATGCACACAGAGAGCCAATAAGAAGACCATTAGCTCAAGTTGTACTGACACCATGGTTATTTGCTATTTTCATTGTGACAAATAGTTTCACAGCAAGTTTAACATCCATAACAATTTCACAAGTAAAACCATCAGTGTTAAATATCGAGACCCTTAAAGAAAGAAATTCCCTAATTGGTTGTGATGGAAATTCCTTTATTGTCAAGTATTTGACTGAAGTACTAGATTTCAAGCCAGAGAACATAAGGAAAATAAATTCCATGAGGGACTACCCTGCTGCCTTTGAGAACAAGGAAATTGAAGCCGCCTTCTTTGTCGCGCCTCATGCTAAAGTCTTTCTTGCAAAGTACTCATGTAAGGGCCTCATCAAAGCAGGGAACACTTTCAGGCTTGGTGGCTTTGGTTTTGTATTTCCAAAAGGTTCTAGTCTGGCTGCGGATATATCCGAGGCATTGTTGAATATGATAGAGAGTGGAGAAACAGAACAACTAGAAAAAGATATGTTGAATGAGATCGAGAATGAAAGCAAAGCCAATTGTTCTTCTTTAGAGACCAAGGGAAAAAATAATTCATCGATAGGCCTTCAGCCTTTCCTTGGTCTGTTTTCGATCTGTTCTACTTTTGCGATTCTTGCTTTGTCATATCACATGATTTGTTTGTTGGTGAAGAATGTAGAGACATTGACGAGCCACGCAGTATTAACATTCACACAGTTATGGAGAATATGGAGATGTACAACCAATTATTTTTCTCGGTGTTGTTCGAAACTCCAATCAAGGATCATGACAAGAGTAAGTAGTTGCACAGAAACAAGAAATGCAGAAGAGAATGTCACAAATAGCCAGCAAATCCCAGTGGTGATTGAGCTTGTTGACACTGTACTGGCTGCTCATGCTTCATGA 2730 0.3663 MKRNSSSQLSICFIVMHLLAWSRVQRGYSLVPERTNNMSIGAVLDLASLMGKHQKIAMEIAVDEFNNRFSSSKMDLHIKDSHGNSAQVIATVMDFSQRNQVHAIIGTITHNEAILASEFSNTIKNIPIMSLTSFAAKPELLSSKLPHFIQVRDDINLHMKCIAAIVGEFKWKKVTVIYELNNDFSSDPGILLSLSYSLRLVGSEIDNHLAFPSLSTLSDPKSKIEKELNNLKKKNNRVFLIVHSSLELANMLCEKAKQIGLMEKGSAWIMPNEVAGLLDSVNSSVIFNMQGVVGFKTHFMEMNETFRKFKFKFQRKLALEYPEEDNINPSIFALQAYDATKAMVVAANKSSQGKLGLEKFSETILSKNGLLLESPTFNIINVIGKSYREMAFWSPTLGFSKNIVGQNKVMEINTNNDDSNGVFKTVYWPGELLSVPKGHNHEERFLRIGIPSNGAFSQFVNVEYDQTKNETFVSGFSIDVFKAAVKRLPYYLNYTFSPFGGSYDEMVDQVYNKTLDAAVGDTSIVAYRYHLVDFSQPYVESGLHMVVTEQPAKSKETWMFLHAFKKEMWLMMIAMHVFVGFVIWLIEKEDNEDLRGLGSMLWFLVTVLFYAHREPIRRPLAQVVLTPWLFAIFIVTNSFTASLTSITISQVKPSVLNIETLKERNSLIGCDGNSFIVKYLTEVLDFKPENIRKINSMRDYPAAFENKEIEAAFFVAPHAKVFLAKYSCKGLIKAGNTFRLGGFGFVFPKGSSLAADISEALLNMIESGETEQLEKDMLNEIENESKANCSSLETKGKNNSSIGLQPFLGLFSICSTFAILALSYHMICLLVKNVETLTSHAVLTFTQLWRIWRCTTNYFSRCCSKLQSRIMTRVSSCTETRNAEENVTNSQQIPVVIELVDTVLAAHAS* 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1051 909 Pfam Ligand-gated ion channel 776 814 IPR001320 GO:0015276|GO:0016020
Mal3g1051 909 PIRSF IGluLR_plant 3 369 IPR017103 -
Mal3g1051 909 PIRSF IGluLR_plant 363 895 IPR017103 -
Mal3g1051 909 Gene3D - 35 155 - -
Mal3g1051 909 SUPERFAMILY Periplasmic binding protein-like I 36 438 IPR028082 -
Mal3g1051 909 SUPERFAMILY Periplasmic binding protein-like II 441 775 - -
Mal3g1051 909 Pfam Receptor family ligand binding region 55 358 IPR001828 -
Mal3g1051 909 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 36 869 - -
Mal3g1051 909 Gene3D - 742 774 - -
Mal3g1051 909 SMART GluR_14 447 780 IPR001320 GO:0015276|GO:0016020
Mal3g1051 909 Gene3D - 156 328 - -
Mal3g1051 909 Pfam Bacterial extracellular solute-binding proteins, family 3 473 775 IPR001638 -
Mal3g1051 909 Gene3D - 645 741 - -
Mal3g1051 909 PANTHER GLUTAMATE RECEPTOR 36 869 - -
Mal3g1051 909 CDD GluR_Plant 444 778 - -
Mal3g1051 909 Gene3D - 439 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1051 Mal-Chr3 42540575 42545522 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1051 27 850 Ion Channels AT2G29100 30.849 8.26e-115 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1051 - - mtr:MTR_5g059920 1352.04