Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1050 ATGTCTCTAACTTCATCTATGAACAATCCAAAATTATTATCTCCTAGATTGCCACATTTCATCCAAGTAGGGGATGATATTAACCTTCACATGAAATGCATTGCAGCAATTGTAGGAGAATTCAAATGGAAAAAGGTGACAGTAATTTATGAATTTAATAATGACTTTTCATCTGATCCAGGAATACTACTTAGCCTCTCTTATTCACTTAGACTTGTTGGTTCTGAGATTGAAAATCATTTAGCTTTTCCTTCCTTATCAACTCTTTCAGACCCAAAATCCATAATTGAAAAAGAGCTTGATAACTTGAAAAAGAAGAGTAATAGGGTCTTCTTGATTGTTCATTCTTCTTTAGAGCTAGCTAACATGCTTTGTGAAAAAGCAAAACAAATAGGTTTGATGGAAAAAGGTTCTGCGTGGATTATGCCGAATGAAGTTGTTGGCCTTCTTGATTCAGTTAACTCTTCTGTTATCTTCAACATGCAAGGTGTTGTTGGATTTAAAACACACTTCGTGGAAACAAGTGACGATTTTAGAAAGTTTAAAATCAAATTCCAAAGAAAGTTTGCACTAGAATACCCTGAAGAGGATAACATTAACCCAAGTATCTTTGCACTTCAAGCATATGATGCTACTAAAGCTATTGTTGAGGCTGAAAATAAATCATCACAAGGAAAGTTTAGCCTTGAACAATTCTCAGAAAAGATTTTATCTAGTAAATTTGAGAGACTAAGCGGAAATACTTTTTTAAAGAATGGACAATTTCTGCAATCACCAACTTTCAACATAATTAATGTGATAGGGAAAAGCTATAGAGAAATGACATTTTGGTCTCAAACACTCGGTTTTTCTAAGAACTTTGTTAGCCATCAAGTAATGGAGACAACAAAAACAAATAATGGTTCTAATGGAGTTTTCAGAACAATTTATTGGCCTGGAGACTTGCAATTGGTTCCTAAGGGATGGACTCTAAGTAGTGAGGAAAGGTCATTGAAAATAGGAGTACCTTCTAATGGTGCCTTTAATCAGTTTGTGAATGTAACACATGACAAGCTCAAGAATGAAACTTCTATTACTGGTTTCTCTATCAATGTCTTTAAAGCAGTTGTTGGACTTTTACCTTATGATTTACAATACAAATTTGTTCCCTTCAATGGGTCATATGATGAAATGGTTGATCAGGTCTACAATAAGACACTAGATGGTGCTGTTGGTGATACAGACATAATGGCTTATAGATATCACTTAGTGGACTTCTCACAACCTTATGTCGAATCTGGCCTCCACATGATCGTAAACGAACAACCTGAAAAATCAAAACAAACATGGATGTTTTTGGATGCCTTTACAAAAGAGATGTGGTTGATGATAACATCTATGCATATTTTTGTGGGAGTTGTTATTTGGTTGATTGAACGGGAAGCTAATCCAGATCTAAGGGGATTTAGGTCCATGCTTTGGTTTTTAGTCACTGTACTATTTTATGCACACAGAGAGCCAATAAGAAGACCATTAGCTCAAGTTGTACTGACACCATGGTTATTTGCTATTTTCATTGTGACAAATAGTTTCACAGCAAGTTTAACATCCATAACAATTTCAAAAACAAAGTCATCGTTGTTAGATATCCAAACCCTTAAAGAAAGAAATTTACCAGTTGGATGTAATGGAAATTCATTTATTGTGAAGTATTTGTCTGAAGTACTGAAATTCAAGCCTGAGAACATTAGAAAATTCAATTCCATTAATGACTACCCTGCTGCCTTTGAGAACAAGAAAATAGAAGCCGCTTTCTTTGTTGCGCCTCACGCTAAAGTATTTCTAGCAAAGTACTCATGTAAGGGTCTCATCAAAGCAGGAAACACTTTCAAGCTTGGTGGCTTTGGTTTTGTATTTCCGAAAGGTTCGAGTCTGGCTACTGACATATCAGAGGCATTACTGAATATGATAGAGAGTGGAGAAACAGAACAACTAGAAAAAGACATGTTGAATGGGATAGGGAGAGGAGGAAAAACCAATTGTTCTTCTTTAGAGAGAAACAAAGAGAAAGATAACTCATCGATAGGTCTTCCGCCTTTCATTGGCCTGTTTTCGATCTGCTCTACTTTTGCTATTCTTGCATTGTCATATCACATGATCTGTTTGTTGGTGAATAATATAGAGACCTTGGCAAGCCACGTAATAGTAATATTGACACAATTATGGAGAATATGGAGATGGACAACCATCTATTTTGCTCGGTGTTGGTCAAGGATCAGGAGAAGAGTAAGTAATTGCATAGAAATAAGAAACGCGGAGGAGAATGTCAATAATAGCCGGCAAAGCCAGGTGGTGGTTGATCTTGTTGATAGTGTATTGGATGCTCATACTTCATGA 2376 0.3586 MSLTSSMNNPKLLSPRLPHFIQVGDDINLHMKCIAAIVGEFKWKKVTVIYEFNNDFSSDPGILLSLSYSLRLVGSEIENHLAFPSLSTLSDPKSIIEKELDNLKKKSNRVFLIVHSSLELANMLCEKAKQIGLMEKGSAWIMPNEVVGLLDSVNSSVIFNMQGVVGFKTHFVETSDDFRKFKIKFQRKFALEYPEEDNINPSIFALQAYDATKAIVEAENKSSQGKFSLEQFSEKILSSKFERLSGNTFLKNGQFLQSPTFNIINVIGKSYREMTFWSQTLGFSKNFVSHQVMETTKTNNGSNGVFRTIYWPGDLQLVPKGWTLSSEERSLKIGVPSNGAFNQFVNVTHDKLKNETSITGFSINVFKAVVGLLPYDLQYKFVPFNGSYDEMVDQVYNKTLDGAVGDTDIMAYRYHLVDFSQPYVESGLHMIVNEQPEKSKQTWMFLDAFTKEMWLMITSMHIFVGVVIWLIEREANPDLRGFRSMLWFLVTVLFYAHREPIRRPLAQVVLTPWLFAIFIVTNSFTASLTSITISKTKSSLLDIQTLKERNLPVGCNGNSFIVKYLSEVLKFKPENIRKFNSINDYPAAFENKKIEAAFFVAPHAKVFLAKYSCKGLIKAGNTFKLGGFGFVFPKGSSLATDISEALLNMIESGETEQLEKDMLNGIGRGGKTNCSSLERNKEKDNSSIGLPPFIGLFSICSTFAILALSYHMICLLVNNIETLASHVIVILTQLWRIWRWTTIYFARCWSRIRRRVSNCIEIRNAEENVNNSRQSQVVVDLVDSVLDAHTS* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1050 791 Gene3D - 27 200 - -
Mal3g1050 791 Gene3D - 331 442 - -
Mal3g1050 791 SUPERFAMILY Periplasmic binding protein-like I 9 322 IPR028082 -
Mal3g1050 791 SMART GluR_14 330 665 IPR001320 GO:0015276|GO:0016020
Mal3g1050 791 Gene3D - 208 330 - -
Mal3g1050 791 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 752 - -
Mal3g1050 791 Pfam Bacterial extracellular solute-binding proteins, family 3 355 660 IPR001638 -
Mal3g1050 791 Gene3D - 443 581 - -
Mal3g1050 791 CDD GluR_Plant 331 663 - -
Mal3g1050 791 SUPERFAMILY Periplasmic binding protein-like II 308 660 - -
Mal3g1050 791 Pfam Ligand-gated ion channel 661 700 IPR001320 GO:0015276|GO:0016020
Mal3g1050 791 Pfam Receptor family ligand binding region 16 267 IPR001828 -
Mal3g1050 791 PANTHER GLUTAMATE RECEPTOR 12 752 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1050 Mal-Chr3 42484084 42487234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1050 6 659 Ion Channels AT5G11210 32.855 3.84e-111 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g1050 - - mtr:MTR_5g059920 1188.71