Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g1015 ATGCCATTTCATTTGCCAGCCTCTCTTCCTCCAAATAGCCTCTCCAAAAGCTTCCACAATCGAACGATGAATCAGGAAGACTTGTCAAAGATTTCACCGTCGCTGGTTTCTTTGGCCACTCTACTAGACCGTGAGCTTCGAGAAGAGGAAGGAGAAAAAACTTTCGTTAAGTATGGAGAAGATAGCATGACCAAGAAAGGAGAAGATTATGGTCTGATCAAAACATGTTGCCACAGGGTTCCTGGAGATCCATCAACTGCTTTTTCAGTCTTTGCAATTTTTGACGGGCATAATGGCATATCAGCCGCAATTTATGCAAAAGAAAACTTGCTAAATAATGTTTTGAATTCAATACCACAAGATATTATCAGCAGCAGTAGGGATGCATGGCTACTTGCCCTTCCTCGTGCTCTAGCGACTGGTTTTGTGAAGACTGACATGGATTTTCAGAGTATCAAGGGAGGAAAGTCTGGAACAACAGCTACATTAGTTGTGGTTGATGATTGTATTGTCACGGTTGCATCTGTTGGTGATTCGCGTTGCATATTAGTAGATACTGAAGGAGGAGGCGTAGTTTCTGTCCTTACGGTTGATCACAGGGTGGAAGATAATGTGGAAGAGAGGGAGCGTGTTACTGCAAGTGGTGGTGAAGTAAGAAGACCCGATATTCGTGGTGGCCCTCTTCGTGTCTGGCCTGGTGGATTATGTCTATCTAGATCAATAGGAGACGCGGATCTGGGAAAATATATCGTTCCAATACCACATGTTAAGCAAGTCAGACTACTTTCAAATGGTGGTGATGGCGGCGGAAGGCTTATCATAGCCTCTGATGGTGTTTGGGATGCTTTATCGAATGATATGGTGGAAGCATCGTGTCGGGGTGTAGCTGCTGAATTTGCTGCAAAGCTAGTGGTTGAGGAAGCTATAAGATCAAAAAAAGGCTTGAAGGATGATACAACCTGCATGGTTGTAGATATTCCTTCTGATCACCTCCCTGTATTACTACCAAGTCCAACTCCAAGAAAGAAATTATGCAATGTGCTAAACCCGCTTCTTTGTCCTTTTGGAAAGAAATCTCAGAAGAACTCTACAAACAAAGCTACCAGAAAGGTTAGTGTTGTTGTGGAAGAGTTATTTGAAGAGGGTTCTGCGTTTATAGACAGGTTTGGTAATGATTTTTTAGTTAATAATAACAACTCTGATCAGACTTTGATCTGTGCAATTTGCCAAGGGGATCAACCCCTTGGTAACGGTCTATCAGGACCGTTGTTGTCTCCATTGGAAGGACCATTTCTCTGCACAAACTGTCGAAAGAGAAAAAGATATCAAGGAAGGAAAGAGGCCATCACAATAATCATCATAAAGTAA 1368 0.4254 MPFHLPASLPPNSLSKSFHNRTMNQEDLSKISPSLVSLATLLDRELREEEGEKTFVKYGEDSMTKKGEDYGLIKTCCHRVPGDPSTAFSVFAIFDGHNGISAAIYAKENLLNNVLNSIPQDIISSSRDAWLLALPRALATGFVKTDMDFQSIKGGKSGTTATLVVVDDCIVTVASVGDSRCILVDTEGGGVVSVLTVDHRVEDNVEERERVTASGGEVRRPDIRGGPLRVWPGGLCLSRSIGDADLGKYIVPIPHVKQVRLLSNGGDGGGRLIIASDGVWDALSNDMVEASCRGVAAEFAAKLVVEEAIRSKKGLKDDTTCMVVDIPSDHLPVLLPSPTPRKKLCNVLNPLLCPFGKKSQKNSTNKATRKVSVVVEELFEEGSAFIDRFGNDFLVNNNNSDQTLICAICQGDQPLGNGLSGPLLSPLEGPFLCTNCRKRKRYQGRKEAITIIIIK* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g1015 455 Pfam Protein phosphatase 2C 83 311 IPR001932 -
Mal3g1015 455 CDD PP2Cc 65 326 IPR001932 -
Mal3g1015 455 ProSiteProfiles PPM-type phosphatase domain profile. 69 326 IPR001932 -
Mal3g1015 455 Gene3D - 55 330 IPR036457 -
Mal3g1015 455 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 25 425 - -
Mal3g1015 455 PANTHER ALPHABET, ISOFORM E-RELATED 25 425 - -
Mal3g1015 455 SMART PP2C_SIG_2 72 326 IPR001932 -
Mal3g1015 455 SUPERFAMILY PP2C-like 65 327 IPR036457 -
Mal3g1015 455 SMART PP2C_4 45 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g1015 Mal-Chr3 41488098 41489465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g1015 23 440 PP2C-type Phosphatase Gene Family AT1G09160 59.584 3.38e-159 455