Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0996 ATGGACACAGTAGAAATGATGATTACATTCCACATGAGAGCTTTGGTCTTTTTCCTTTGGCTCTTTCTCTCTTCATTAGGTAAAAACCTTCTAACTTGTGAAACAACATCACCACATGATTCTAGCTACCATTGCAATGAAAATGAGTCACATAATCATCATTGTGAAACATTTGCACTCTTTTTCACAAACTCTCATTACTCCTCTCTTACAAACCTCACCCTATACTTAGGACTCAACAGGTTTGTCATAGCAGAAACCAATGGTTTTTCTTCAGAAACTGAGTTCCTTCCACAGGATCACCCTCTTCTTATACCAATTGATTGCAAATGCAAAAAAGGTGATTTTTTTCAAGCTGAATTAACAAAAACTACTGTCAAAGGTGAGAGTTTTTATGACATTTCTCAATCATTTGAAGGTTTAACAACTTGCAAGGCTATTAAAGATAACAATCTTGGTTTATCACCTTGGAACCTTGATGCTAAACTCAAATTGATTATCCCTTTGAAATGTGCTTGCCCTTTTTCTTCTTTTGTTATACCAAAACCAAAACTTCTTCTTTCTTATCCTATAATTGAAAATGATACAATTTCAAATTTGGCCTTAAAGTTCAATATTACAAAAGAAGCTATTGTTGTTGCCAATAACATCTCATCAGAAGAAAGAAGCTTAGAACCTTTTACATCCATTTTAATTCCATTGAATGGTAAGCCTTTCCTTGATCCTTTAGCTAAACCAAAACAACCAAATTCAGACTTTCCAAGAACAAACAATATTCCAATAAATAGTGAGCACAAGAAGTCAACAATGAGAAAGAGTGAATTGTATATTGGTCTAATTGGTGTTGCAATTGGAGTTTTCTTTGCTTTATTAGTAGCTTTTTTATTCATCTGGTTGAAGCAAAAGAAGGTGGAAGAAAATTCATGCAAAGAAAGAGATATGGAGCTACAACATCTAAATCAAAGTGTGAGAACAACAAGTGATAAGAAAGTTTCATTTGAAGGGTCACAAGACACACTTGATAGTAAAATCATTGACACGACACCGCGTAAGAAGTTATTGGAGACATACACAATTGATGATTTGAGAAAAGTAACAGAGGATTTCAGTTCAAATTGTCACATTGAAGGGTCAGTTTTTCATGGTTGTTTAAATGGTAAGAACATGGCAATCAAAAGAATAAAAACTGAGATGGTGTCAAAATTAGATCTTGGTCTTTTTCATGATGCAATTCATCATCATCCTAACATAATTAGCCTCTTTGGAACAAGTATTTCAGAAGGATCAGATTCAGAGTCAATTTTGGTTTTTGAGTATGCAAAAAATGGCTCATTGAAAGATTGGCTTCATGGTGGCTTGGCCATCAAGAATCAATTCATTTCTTCTTGCTATTGTTTCTTGAATTGGAACCAAAGGCTTAGGATTTGTCTTGATGTTGCAAGTGCTTTGGATTACATGCACCATGTTATGATGCCAAGTTATGTGCATAGAAATGTGAAGAGTAGGAACATCTTCTTAGATGAAGAATTTGGTGCTAAATTAGGTAATTTTGGTATGGCAAATTTTGTTGAGAATGAAACTGAGGATCCTCAATTTTACTCAACTAATTATGCTTCTTGGAGTATAGGTTATTTAGCACCTGAATATGTTCACCAAGGTATAGTTTCAACAAGCATTGATATATTTGCTTTTGGTGTGGTTTTGTTAGAAGTTTTATCCGGTCAAACACCTATAAGTGGATCAAGCTGTGATAAAGGTGAAGGAAGTGTTTGGCTTTGTGACAAAATAAAGACAATTTTGAAGTCAGAAAATAATGTGAATGAATTATTAAGGGAGTGGATAGATAGTGCATTAGGTGAAAATTTCTCATTTGATGCAGCTTTGGAAGTGGCTAATATTGCAAGAGCTTGTGTGGAGGAAGATTGTTGTTTGAGGCCTAGTGCAAGGGAAATTGTTGAGAAGCTATCAAGATTGGTGGAGGAATTACCAAATGAGGAACATCAAGTTTTAATGAGTGAAAGCTCTTGCAAACCTCTTGTGGAAGCACTAGGAAGCAGCAGTATGTGA 2067 0.3469 MDTVEMMITFHMRALVFFLWLFLSSLGKNLLTCETTSPHDSSYHCNENESHNHHCETFALFFTNSHYSSLTNLTLYLGLNRFVIAETNGFSSETEFLPQDHPLLIPIDCKCKKGDFFQAELTKTTVKGESFYDISQSFEGLTTCKAIKDNNLGLSPWNLDAKLKLIIPLKCACPFSSFVIPKPKLLLSYPIIENDTISNLALKFNITKEAIVVANNISSEERSLEPFTSILIPLNGKPFLDPLAKPKQPNSDFPRTNNIPINSEHKKSTMRKSELYIGLIGVAIGVFFALLVAFLFIWLKQKKVEENSCKERDMELQHLNQSVRTTSDKKVSFEGSQDTLDSKIIDTTPRKKLLETYTIDDLRKVTEDFSSNCHIEGSVFHGCLNGKNMAIKRIKTEMVSKLDLGLFHDAIHHHPNIISLFGTSISEGSDSESILVFEYAKNGSLKDWLHGGLAIKNQFISSCYCFLNWNQRLRICLDVASALDYMHHVMMPSYVHRNVKSRNIFLDEEFGAKLGNFGMANFVENETEDPQFYSTNYASWSIGYLAPEYVHQGIVSTSIDIFAFGVVLLEVLSGQTPISGSSCDKGEGSVWLCDKIKTILKSENNVNELLREWIDSALGENFSFDAALEVANIARACVEEDCCLRPSAREIVEKLSRLVEELPNEEHQVLMSESSCKPLVEALGSSSM* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0996 688 ProSiteProfiles LysM domain profile. 187 232 IPR018392 -
Mal3g0996 688 Gene3D Transferase(Phosphotransferase) domain 1 440 677 - -
Mal3g0996 688 SUPERFAMILY Protein kinase-like (PK-like) 354 655 IPR011009 -
Mal3g0996 688 Pfam Protein kinase domain 377 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0996 688 Gene3D LysM domain 183 238 IPR036779 -
Mal3g0996 688 ProSiteProfiles Protein kinase domain profile. 351 670 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal3g0996 688 PANTHER PROTEIN LYK2 7 683 - -
Mal3g0996 688 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 683 - -
Mal3g0996 688 Pfam LysM domain 126 168 IPR018392 -
Mal3g0996 688 Pfam LysM domain 192 233 IPR018392 -
Mal3g0996 688 Gene3D Phosphorylase Kinase; domain 1 342 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0996 Mal-Chr3 40812467 40814533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0996 43 681 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.060 1.70e-143 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mal3g0996 Pkinase 3.5e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0996 - - gmx:100816082 993.03