Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0982 ATGAGTGGAAATTCCCCATGTGCTTCATGCAAGCTTCTGAGACGCAGATGCACAAAAGATTGCATCTTTGCTCCTTATTTCCCTTCTCATGAACTCCAAAAGTTTGTCATAGTTCACAAGGTTTTTGGTTCTAGCAACGTTGGCAAAATGTTACAGGTAGTTCCAGTTCACCAAAGAGCAGATGCAGTGAGCAGTTTAGTCTATGAAGCAAATGCAAGAATCAGAGACCCAGTTTATGGTTGTGCTGGAGCAATTTATTACTTGCAAAATCAAGTTTTTGAGCTTCAAATGCAACTTACAGTTGCTCAAGCAAACATACTCTGCATCCAGATGCAAAATAAGCAAGTGATTCCAACACTAGAAATCAACCAAGATCAGAATTCTTACCTTATCCCAGATGTGATTCCAACACCAAAAGGTTCTTCTTTTAGTAATAATAGTAATAATAATGTAATTCACGGTTCTCTTAAAAGAGATGACATGTATGGTTTCTTGAATAAAATTTGA 507 0.3708 MSGNSPCASCKLLRRRCTKDCIFAPYFPSHELQKFVIVHKVFGSSNVGKMLQVVPVHQRADAVSSLVYEANARIRDPVYGCAGAIYYLQNQVFELQMQLTVAQANILCIQMQNKQVIPTLEINQDQNSYLIPDVIPTPKGSSFSNNSNNNVIHGSLKRDDMYGFLNKI* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0982 168 PANTHER LATERAL ORGAN BOUNDARIES (LOB) DOMAIN PROTEIN 1 138 - -
Mal3g0982 168 ProSiteProfiles LOB domain profile. 5 106 IPR004883 -
Mal3g0982 168 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 138 - -
Mal3g0982 168 Pfam Lateral organ boundaries (LOB) domain 6 103 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0982 Mal-Chr3 40278977 40281055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0982 3 131 AS2 family AT2G30130 71.429 1.41e-66 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal3g0982 LOB 1.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0982 - - tcc:18585801 223.402