Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0976 ATGGGGGAGAGTTCCATGAACCTTTTAGAAAGTGTAGCAAGAAACAACAAAATGGAAGAAGAACTTGAAAGAGAAGAAGAACAAGAAATAGATCCAGAAAGTAGCAATCCACTAAACCAAACATTGATCAAGAGGAACAGAACACTATCATCAAATCCACTTGCTCTTGTTGGTGAAAAAGTTTCCTATATAGAAAGCTTAGACTATGAGATTAATGAGAATGATCTATTCAAACATGGTTGGAGAAGCAGATCAAGAATTGAAGTATTACAATACATATTCATGAAATGGGTGCTTGCATTTCTTGTTGGACTTCTCACTGGTATTATAGCTACTCTTATAAATCTTGCTGTTGAGAACATTGCTGGATATAAGTTTTTGGCTGTTCTTAAATACATCAATGGAGACAGGTACTTGGCAGGTTTCCTATATTTCATGGGAATGAATTTCGTTTTAACATTTGTTGCTGCTATTCTGTGTGTGTGTTTTGCACCCACAGCAGCTGGTCCTGGGATACCTGAAATCAAAGCTTATCTTAATGGTGTTGATACACCTAACATGTTTGGTGCTACAACAATGATTGTTAAGATAATTGGAAGCATTGGAGCTGTATCAGCAGGCCTAGATCTTGGGAAAGAAGGACCTTTGGTACATATAGGCAGCTGCATTGCATCCTTACTAGGTCAAGGAGGCCCTGACAATTACAAAGTCAAATGGCGTTGGCTACGATATTTCAACAATGATCGCGACCGCCGGGATCTTATTACCTGCGGTGCATCTTCAGGAGTTTGTGCAGCGTTCAGGTCCCCTGTCGGTGGAGTTCTCTTTGCCCTTGAAGAGGTGGCAACCTGGTGGAGAAGTGCTCTTCTGTGGAGAACCTTTTTTTGCACAGCTGTGGTGGTGGTAATTCTTAGGGCCTTCATTGAAATCTGCAACTCCGGGAAATGTGGTCTTTTCGGTGCAGGCGGGCTGATCATGTTTGATGTTAGCAATGTTACTGTTAGGTACCATGTGATGGATATCCTCCCTGTTGCAGTCATTGGAATCATAGGTGGGTTATTGGGAAGCCTTTATAATCATCTTCTACACAAGGTCCTCAGACTCTACAATCTAATCAATCAGAAAGGAAAAATACATAAACTCCTTCTCAGTCTTGCAGTAGTACTATTCACGTCAGCGTGTCAATATGGTCTCCCATTCCTAGCAAACTGCACCCCTTGTGATTCATCATCGCTTCCAGAGTCAGAACCTGTCTGCCCCACCAATGGAAGGTCTGGAAATTTCAAACAATTCAATTGCCCACCTGGCCACTACAACGATCTTGCTACTCTACTGCTTACCACTAATGACGATGCTGTTCGAAACATATTCTCAACTAACACACCTCATGAATATCAACCCTCCTCCCTCATAATTTTCTTTGCACTATATTGCATATTAGGACTAATTACTTTCGGAATTGCTGTGCCGACTGGACTCTTCCTCCCAATCATCCTTATGGGCTCGGCTTACGGCCGCCTTGTTGGTATGTTGATGGGACCTCATACAAAAATTGACCAAGGATTGTTTGCTGTACTTGGTGCAGCCTCCCTCATGGCTGGTTCCATGAGGATGACTGTATCCCTTTGTGTGATTTTCCTTGAACTTACCAGCAATCTTCTCCTACTACCAATAACAATGATTGTTCTCCTAATAGCCAAAACTGTTGGAGATTGCTTCAACCCAAGCATCTATGAGATTATACTGCATTTGAAAGGTCTTCCTTTCATGGATGCAAATCCTGAGTCATGGATGAGAAATCTCACTGTCGGCGAGCTTGTAGATGTAAAGCCGGCAGTGATTTCCCTCCAAGGAGTGGAAAAAGTAGCCAAGATAGTAGATGTTTTGAAAAACACTACACATAATGGTTTCCCGGTGATGGACGATGGGATAGTACCGCCAGTAGGACAGGCCAACGGGGCAACGGAACTGCATGGACTAATTCTAAGAGCACACCTTATCCAAGCATTAAAGAAGAAGTTTTTCTTGAAAGAGAGAAGAAGAACAGAGGAATGGGAAGTGAGAGAGAAATTTACCTGGGTAGAGCTGGCCGAGAGAGAAGGGAAAATTGAAGAGGTTGCTATAACAAGGGAAGAAATGGAGATGTTTGTTGATCTACATCCTCTCACCAATACAACTCCATTTACTGTGGTAGAGAGCATATCAGTTGCAAAAGCAATGATCCTCTTCAGGCAAGTTGGACTTCGTCATCTGCTTGTAGTTCCGAAATATCAGGCATCAGGGGTATGCCCTGTAATTGGGATTTTGACCAGACAGGATCTATTGGCCTACAACATTCTGACAGTCTTTCCTCACCTGGCAAAATCTAAGAACAGACAGAAGAGAAATTGA 2391 0.4245 MGESSMNLLESVARNNKMEEELEREEEQEIDPESSNPLNQTLIKRNRTLSSNPLALVGEKVSYIESLDYEINENDLFKHGWRSRSRIEVLQYIFMKWVLAFLVGLLTGIIATLINLAVENIAGYKFLAVLKYINGDRYLAGFLYFMGMNFVLTFVAAILCVCFAPTAAGPGIPEIKAYLNGVDTPNMFGATTMIVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASLLGQGGPDNYKVKWRWLRYFNNDRDRRDLITCGASSGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFCTAVVVVILRAFIEICNSGKCGLFGAGGLIMFDVSNVTVRYHVMDILPVAVIGIIGGLLGSLYNHLLHKVLRLYNLINQKGKIHKLLLSLAVVLFTSACQYGLPFLANCTPCDSSSLPESEPVCPTNGRSGNFKQFNCPPGHYNDLATLLLTTNDDAVRNIFSTNTPHEYQPSSLIIFFALYCILGLITFGIAVPTGLFLPIILMGSAYGRLVGMLMGPHTKIDQGLFAVLGAASLMAGSMRMTVSLCVIFLELTSNLLLLPITMIVLLIAKTVGDCFNPSIYEIILHLKGLPFMDANPESWMRNLTVGELVDVKPAVISLQGVEKVAKIVDVLKNTTHNGFPVMDDGIVPPVGQANGATELHGLILRAHLIQALKKKFFLKERRRTEEWEVREKFTWVELAEREGKIEEVAITREEMEMFVDLHPLTNTTPFTVVESISVAKAMILFRQVGLRHLLVVPKYQASGVCPVIGILTRQDLLAYNILTVFPHLAKSKNRQKRN* 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0976 796 PANTHER CHLORIDE CHANNEL PROTEIN 9 791 - -
Mal3g0976 796 PRINTS Plant CLC chloride channel signature 70 78 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal3g0976 796 PRINTS Plant CLC chloride channel signature 313 320 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal3g0976 796 PRINTS Plant CLC chloride channel signature 295 305 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal3g0976 796 PRINTS Plant CLC chloride channel signature 441 457 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal3g0976 796 PRINTS Plant CLC chloride channel signature 281 289 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mal3g0976 796 SUPERFAMILY CBS-domain pair 594 777 IPR046342 -
Mal3g0976 796 CDD ClC_6_like 65 590 - -
Mal3g0976 796 MobiDBLite consensus disorder prediction 1 38 - -
Mal3g0976 796 CDD CBS_pair_voltage-gated_CLC_euk_bac 610 777 - -
Mal3g0976 796 Pfam CBS domain 725 777 IPR000644 -
Mal3g0976 796 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 9 791 - -
Mal3g0976 796 Gene3D Clc chloride channel 88 591 - -
Mal3g0976 796 Coils Coil 8 29 - -
Mal3g0976 796 ProSiteProfiles CBS domain profile. 723 789 IPR000644 -
Mal3g0976 796 Gene3D - 592 782 IPR046342 -
Mal3g0976 796 Pfam Voltage gated chloride channel 153 570 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 PRINTS Chloride channel signature 489 509 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 PRINTS Chloride channel signature 260 279 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 PRINTS Chloride channel signature 539 558 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 PRINTS Chloride channel signature 577 591 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 PRINTS Chloride channel signature 196 215 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 PRINTS Chloride channel signature 521 537 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 PRINTS Chloride channel signature 165 182 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mal3g0976 796 SUPERFAMILY Clc chloride channel 74 592 IPR014743 -
Mal3g0976 796 SMART cbs_1 612 671 IPR000644 -
Mal3g0976 796 SMART cbs_1 726 779 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0976 Mal-Chr3 40024930 40029705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0976 31 790 Ion Channels AT3G27170 79.342 0.0 1239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0976 K05016 - gmx:100788620 1363.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g0976 3 40024930 40029705 Mal6g4184 6 120543473 120549383 PCT