Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0958 ATGGCTACAACACTGAGAGAAAGCCCTGGAATCTTGATATTTGATGAAGGACACAATCCTATAAGCAATAATTCAAGGCTAGGGAAATGTTTAATGAAACTACCAACAGAATTCAGAATATTGCTTTCTGGCACATTGTTTCAGAACAATTTCTGTGAATATTTCAACACGCTTTGTTTAGCTGGACCAAAACTTCTTCACGAAGTTCTTCAGGAGTTAGATTCTGAGTACAGGAGCGTAGGGGAAATAGCGAACAAGGCGCAACACCTACTATAG 276 0.3913 MATTLRESPGILIFDEGHNPISNNSRLGKCLMKLPTEFRILLSGTLFQNNFCEYFNTLCLAGPKLLHEVLQELDSEYRSVGEIANKAQHLL* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0958 91 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 8 71 IPR027417 -
Mal3g0958 91 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2 1 89 - -
Mal3g0958 91 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 1 89 IPR044567 GO:0080188
Mal3g0958 91 Pfam SNF2-related domain 11 77 IPR000330 GO:0005524|GO:0140658
Mal3g0958 91 Gene3D - 2 90 IPR038718 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0958 Mal-Chr3 38611870 38612145 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Mal3g0958 SNF2_N 2.8e-06 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0958 K10875 - gmx:100785036 136.732