Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0951 ATGGGCAGAGGTTCAGAACCTATTTTGTTCCAACATGCTGCATGCAAGAGTCAAAGAAGAAGGTGCCCTTCTGATTGCATTTTCTCTCCATATTTCCCTCCCAATGATCCTCAAAGATTTGCTTCTGTTCACCGAATCTATGGTGGTAGCAATGTTGGAAAAATGCTTCAGCAATTGCCTCACTATGTAAGACATCAAGCTGTAAATTCTATGTATCTAGAAGCACAATGTAGGATTCAAGATCCTGTTTATGGGTGTGTTGGGATTATCTCTAAATTGTCTCAACAAATTCATGATACAGAAGTTGAGTTGGCCAAAATCAAAACTCAAATTGCTTGTCATAAACTCCACAATCAACAATTTGAAGCTGAATCAAACTCCAATGTCATGTCAACAATTGATGCTGAATCAAACTTAAGCTTTTTGCCACTACAAAGTAACAACATTGAGGAGATTCAATGGCCTAATCAAGCTCATAATTGGTTCAATTAA 492 0.374 MGRGSEPILFQHAACKSQRRRCPSDCIFSPYFPPNDPQRFASVHRIYGGSNVGKMLQQLPHYVRHQAVNSMYLEAQCRIQDPVYGCVGIISKLSQQIHDTEVELAKIKTQIACHKLHNQQFEAESNSNVMSTIDAESNLSFLPLQSNNIEEIQWPNQAHNWFN* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0951 163 Coils Coil 90 110 - -
Mal3g0951 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 12 124 - -
Mal3g0951 163 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Mal3g0951 163 Pfam Lateral organ boundaries (LOB) domain 13 108 IPR004883 -
Mal3g0951 163 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 12 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0951 Mal-Chr3 38086011 38086939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0951 13 130 AS2 family AT3G26660 59.322 2.40e-47 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mal3g0951 LOB 5.6e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0951 - - mtr:MTR_7g028905 221.476