Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0932 ATGGCAACCGCAAGGACAGTGCAAGATGTTTCTCCACATGAGTTCGTCAAGGCTTACTCTGCTCATCTGAAACGATCTGGCAAGATGGAGCTTCCAGAATGGACAGATATTGTGAAGACTGCAAGGTTTAAGGAGTTGGCTCCTTACGATCCAGACTGGTACTATGTCAGAGCTGCTTCCATGGCAAGGAAGATCTACTTGAGGGGAGGACTCGGTGTTGGTTCATTCCAGAGGATTTATGGTGGAAGCCAGAGGAATGGTAGTCGTCCACCTCATTTCTGCAAGAGCAGTGGTTCCATTGCACGTCACATTCTCCAACAGGGTGGCAGGAAAATCACTTCCACTGGCAGGAGGGATTTGGACCAAGTTGCCGGACGTATTATGGTTGCACCTTGA 396 0.4924 MATARTVQDVSPHEFVKAYSAHLKRSGKMELPEWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGSFQRIYGGSQRNGSRPPHFCKSSGSIARHILQQGGRKITSTGRRDLDQVAGRIMVAP* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0932 131 PANTHER 40S RIBOSOMAL PROTEIN S19-3 3 130 - -
Mal3g0932 131 PANTHER 40S RIBOSOMAL PROTEIN S19 3 130 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mal3g0932 131 SUPERFAMILY "Winged helix" DNA-binding domain 6 129 IPR036390 -
Mal3g0932 131 Gene3D - 1 130 IPR036388 -
Mal3g0932 131 SMART Ribosomal_S19e_2 6 130 IPR001266 GO:0003735|GO:0005840|GO:0006412
Mal3g0932 131 Pfam Ribosomal protein S19e 6 128 IPR001266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0932 Mal-Chr3 37504727 37505159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0932 1 130 Cytoplasmic Ribosomal Protein Gene Family AT5G61170 77.465 1.53e-80 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0932 K02966 - gmx:100499800 251.136