Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0880 ATGTTTAGTGTTGAAACTTTTTTGGTGTGTAGTATTTGTTTTGTTATCTACAAGTCTATCTGGAATTTGTTCCATTTTTGTCTTTTTTTGCTTGATGACGAAAAGAATTTATTACCAAAAGAGGAATTACAAGATATGCTAACCAAAAATCTAGATACAATATTCCAGTACTGTATATCAACAACAGAAGACAGACTTCAACAGATACATGTATGCGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTTTCCAGCCACAGTACCTGCCTGCTTTGCCGTTTGTCCCTACTAACTACTGCGAAATCTTCGACAGAAATATCCGAAATGCAGATGCAACAAAGAAATGAAGAAACACTAGGCATGGAATTCTCTAACTCAAAATATCCTAGACATCTAGAAACCAATGTCATTCAAAATGTCTCTAGAGAAGCTTCGATCAATGGTCACCGCGTTGAAGTTGAAGAGTGA 474 0.365 MFSVETFLVCSICFVIYKSIWNLFHFCLFLLDDEKNLLPKEELQDMLTKNLDTIFQYCISTTEDRLQQIHVCGHTFHMSCIDLWLSSHSTCLLCRLSLLTTAKSSTEISEMQMQQRNEETLGMEFSNSKYPRHLETNVIQNVSREASINGHRVEVEE* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0880 157 Pfam Ring finger domain 62 95 IPR001841 -
Mal3g0880 157 PANTHER RING-H2 FINGER PROTEIN ATL7-LIKE 61 112 - -
Mal3g0880 157 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 61 112 - -
Mal3g0880 157 SUPERFAMILY RING/U-box 58 103 - -
Mal3g0880 157 ProSiteProfiles Zinc finger RING-type profile. 58 95 IPR001841 -
Mal3g0880 157 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 33 145 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0880 Mal-Chr3 34881281 34885350 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0880 22 126 C3H Transcription Factor Family AT4G10160 43.119 1.21e-16 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0880 K19039 - gmx:100794211 120.553