Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0872 ATGCAAGAGCAAGAATTTTTTAGCCTTATTCCTGTTGGTTCATTATCTTGTTTGTCTGACAACAACAATGAAGGGAAATATGAGAACAAGAAAGATCAACCCTCAAGCTCTAATTCCAAGAGGTCTATTGATTTTGTCCAACTCTCGAAAGATCCGATTCGCAGGTCAAAGGTACAAGAGTACGATTTTTTTAGCCCTATTCAAATTGGTTCATCGTCTGGTTTGGCTAAGAATAAAAATGAAGGGAAAGATGAGAACAAAAATAAAGAAAAGAGTTCGGGTTCAAGGTATTTTTCATGCTCCTTTTGCAAGGGAAAATATTCTACACTTCAAGCATTAGGAGGACACCAGAACGCTCATAGAGCAGAGCGTGCATTAGAAAGGAAACGTAAACGAAGGTATGATGTTAGTTTTTTAAGTTTAGGGCGGCCTCAGTATAACCCTTATTTTAAGTATCCGAGTACTCATTTTACACCTTATAATTATGGGTTACTTGGGGTTAGAATGGACTCAACTATTCAAAAACAACCTTATATTAACCCTAGGATTACATCACATGGTTTTGGGTATGGTTATGGTGCTTTATCTTTGCAAGAGATATTAAACCCTTCTCTTGTTCGCTTGAGAAATAATATTGAGGGTAGTCATAGTAGGTTTGGAATTACAGGTATGGGTGGAGCAACTACTTCAAGTGTTGAAGATGCTACAAAAAATAATATTGGAGCTGTTCTACAATTTGGAGATTCTTCTACAAATATTGGTACAAGTACAAACTCAAACAAAGACAATAAAAATATTGTGGCTTCTACTTCTACCATGAATGATATTCATAAATCAAACTCAAACATTGAAGAAGAACCCTCCGATTCTACTTGTTCTGGGCTTGATTTGACACTTAAGCTTTAA 906 0.3587 MQEQEFFSLIPVGSLSCLSDNNNEGKYENKKDQPSSSNSKRSIDFVQLSKDPIRRSKVQEYDFFSPIQIGSSSGLAKNKNEGKDENKNKEKSSGSRYFSCSFCKGKYSTLQALGGHQNAHRAERALERKRKRRYDVSFLSLGRPQYNPYFKYPSTHFTPYNYGLLGVRMDSTIQKQPYINPRITSHGFGYGYGALSLQEILNPSLVRLRNNIEGSHSRFGITGMGGATTSSVEDATKNNIGAVLQFGDSSTNIGTSTNSNKDNKNIVASTSTMNDIHKSNSNIEEEPSDSTCSGLDLTLKL* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0872 301 MobiDBLite consensus disorder prediction 74 95 - -
Mal3g0872 301 PANTHER ZINC FINGER PROTEIN JAGGED 75 301 IPR045320 GO:0003700
Mal3g0872 301 PANTHER ZINC FINGER PROTEIN KNUCKLES 75 301 - -
Mal3g0872 301 MobiDBLite consensus disorder prediction 14 48 - -
Mal3g0872 301 ProSitePatterns Zinc finger C2H2 type domain signature. 100 120 IPR013087 -
Mal3g0872 301 MobiDBLite consensus disorder prediction 78 92 - -
Mal3g0872 301 ProSiteProfiles Zinc finger C2H2 type domain profile. 98 125 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0872 Mal-Chr3 34222182 34223087 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0872 93 215 C2H2 Transcription Factor Family AT5G01860 34.815 5.47e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0872 - - mtr:MTR_3g011970 279.641