Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0850 ATGTCTGAAGACAACAATCCAAATACAATCTCCAAGACATTAGAAAATGGAGCTGCACATTACATTGCTAAACCCTTTTTTGCTGAAGACTTCAAAGATATTTGGAAATATGCTAAGGAAGCTAAGAAAGATAAACTTTTTATTGAAAGTTTATTTGTGAGAAACGAAGAACTAGAAACATCAAGTGAGCCTAAGACCAAAAAGAAATATGGCAAGAGAAAGAGTGAAGAATCCCAAAGAGAAGGAGAATTTAAAGTTGTTAAGAAACCAAAGCTTGTTTGGACACCTTCTCTTCACAATCTTTTTGTGCATGCTATTGAGCGAATTGGATTGGATAGGGCTGTGCCAAAGACAATTCTAAAGATCATGAATGTACGGAACTTGACCAGGGAAAATGTAGCAAGTCACTTGCAGAAGTATCGAATATTTCTTCGTGATGTAGCCGAGAAAGGAATGGATGGAGACATAACCCATAGAGCGTTGAGATCAAGGTTTGCATCTGGTCTTCCAATGTCCGTGATTAAAGAAATCCAAGAAAAAAGAGCAAACAAACTTCGCGCGCCAATACTTCAATATTTTCAAACATTGGCATATCAAAAAAACAAAGATGCAAACAATGTTGTTAACCATTTCAATCAATTTCCAACACACCATGTTGATCACATCCCTTATATTCAAAAGGGATTGACACTACAAGATTTGGATCAAGTTAGGCTTGAAAAATCAAAATTGGAAACCAATGTTGTTGTGGATAATAATTTCAATGATCAAAACAGGTTTGGAATAAGCTCTTCAAACCTTCCAATTTTTCAACTAAAAAACTCATTCAATGATGGTGCTTCAACTAGCTTTTCATCATATGGAGGTGGACAAGGATTGATAGCTTCTTCTCTTTTCAATCATGGTTCAATTGGAAGTAACACTTTCAATCATATCAATGTTGTTGTGGATAATAATGTCAATGACCAAAACAGGTTTGGAATAAGCTCTTCAAACCTTCCATGTTTTCAACTAAAAAACTCACTCAATGATGGTGCTTCAACATCATATGGAGGTGGACAAGGATTGATGGCTTCTTCTCCTTTCAATCATGGTTCAATTGGAAGTAACACTTACAATCATATCAATAATGGTGTGAAAAATTCAAACTTTGGATCTTTGATAGACACTAATGTTATGCCTCAAAATGTTACTTTTGGTGTAAGAAACAATAATCCATTTCCAATTCAGCTGAATAATGGAGTAGGAATGGTTGGAAATGGAACTTTGAATAATGGATCAAGGGCTTCTAGTGCAATTAACAATTATTTTGGTTATAATGAAGGGGGCCAAAATGAAAATATGAATTTTGGATTTTTGGTGAATGAAAATTTTGGTTTGGTTCAAGGAGGGTTTGGTTTGAACTGTATTTCTGATGTTAGGCGTGGGAGTGGAACTGAGTTTCTAGCGGGATCAAATAATAATGAAGGAAATGTTTCTAAGATTAGAGAATTTCCTCTGCAGAAATTAGATGGAAATGTTTTTAATCAAATGGAATTTAACTTTTCTGATTTCTTGATGGCTGGTGACATGAATCTTCATAATGAGTTATATAAAGGTGGTGATGATATCTCTCCTCAAGCTGAAATCACATCTTGTGTGCTGAACAAGTCACCAATAGATTCAAACCACAACTCGCAGGCAATGTCTAAAGCAAGCACCTCATCTACTCATCTGGCAAGTCAACTTGAATTTGATATGGCTATTATTGAAGCCTGGTTTGGTACTATAGAAGACTAA 1779 0.3519 MSEDNNPNTISKTLENGAAHYIAKPFFAEDFKDIWKYAKEAKKDKLFIESLFVRNEELETSSEPKTKKKYGKRKSEESQREGEFKVVKKPKLVWTPSLHNLFVHAIERIGLDRAVPKTILKIMNVRNLTRENVASHLQKYRIFLRDVAEKGMDGDITHRALRSRFASGLPMSVIKEIQEKRANKLRAPILQYFQTLAYQKNKDANNVVNHFNQFPTHHVDHIPYIQKGLTLQDLDQVRLEKSKLETNVVVDNNFNDQNRFGISSSNLPIFQLKNSFNDGASTSFSSYGGGQGLIASSLFNHGSIGSNTFNHINVVVDNNVNDQNRFGISSSNLPCFQLKNSLNDGASTSYGGGQGLMASSPFNHGSIGSNTYNHINNGVKNSNFGSLIDTNVMPQNVTFGVRNNNPFPIQLNNGVGMVGNGTLNNGSRASSAINNYFGYNEGGQNENMNFGFLVNENFGLVQGGFGLNCISDVRRGSGTEFLAGSNNNEGNVSKIREFPLQKLDGNVFNQMEFNFSDFLMAGDMNLHNELYKGGDDISPQAEITSCVLNKSPIDSNHNSQAMSKASTSSTHLASQLEFDMAIIEAWFGTIED* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0850 592 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 468 IPR045279 GO:0009736
Mal3g0850 592 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 94 145 IPR017930 -
Mal3g0850 592 PANTHER RESPONSE REGULATOR 23-RELATED 1 468 - -
Mal3g0850 592 Gene3D - 86 146 - -
Mal3g0850 592 SUPERFAMILY Homeodomain-like 87 146 IPR009057 -
Mal3g0850 592 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Mal3g0850 592 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 142 IPR006447 GO:0003677
Mal3g0850 592 MobiDBLite consensus disorder prediction 62 82 - -
Mal3g0850 592 Pfam Myb-like DNA-binding domain 93 141 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0850 Mal-Chr3 32873379 32879877 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0850 1 226 Response Regulator Gene Family AT5G58080 29.008 2.69e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal3g0850 Myb_DNA-binding 4.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal3g0850 - K14491 mtr:MTR_7g026400 612.453