Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal3g0826 ATGGATTCCATCAAGAAAAGAAAGATCATGACAAAAGAATACGAAGGACGTGCTGTGGGAATAGATCTTGGTACAACATATTCTTGTGTCGCTGTGTGGCTTGATGAACATCATAGGGTTGAGATTATTCACAATGATCAAGGAAACAGAACTACACCTTCTTTTGTTGCTTTCAACAATGAGCAAAGGTTGATTGGTGATGCTGCTAAGAATCAATCTGCCACTAACCCTGAAAACACTATCTTTGATGCTAAGAGGTTAATTGGTAGGAAATTTAGTGATCTGGTTGTTCAAAATGATATAAAGTTGTGGCCATTCAAGGTTACTTCTGGTGTTAATGACAAGCCTATGATTACTATTAAGTACAAGGGTGAAGATAAGCATTTTTGTGCTGAGGAAATATCTTCGATGGTCCTTGCAAAGATGCGAGAGGTTGCAGAGGCATATCTAGGGTCGTCGGTCAAGAATGCTGTTATTACTGTGCCGGCTTACTTTAATGATTCTCAGCGAAAGGCCACCATAGATGCTGGTGCTATTGCTGGCCTCAATGTCATTCGGATAATCAACGAACCTACTGCTGCAGCTATTGCATATGGCCTTGACAAGAGAAGCGACATTGTTGGTAAGCGAAATATTTTTGTCTTTGATCTGGGTGGCGGTACTTTTGATGTGTCTATCCTCACAATTAAGGGTGATGTCTTTGAAGTAAAAGCCACCGCAGGAAACACTCACCTTGGGGGAGAGGACTTCGATAACAGAATGGTGAACTATTTTGTTGAGGAGTTCAAAAAGAAGAATAAAATGGACATCAGTGGGAACCCAAAATCCTTAAGGAGGTTGAGAACTGCTTGTGAGAGGGCAAAAAGGATACTATCTTTTGCTTTTGTCACCACTGTTGAGGTAGATTCTTTATTTATGGGAATCGACTTTTCTTCATCAATCACTCGTGCAAAATTTGAGGAACTTAATATGGACTTTTTCAATGAGTGTATGAATATTGTTGACAGTTGTCTCAGGGATTCAAAGATATACAAGAGTGATATTGATGATATTGTTCTTGTCGGTGGCTCGTCTAGGATTCCCAAAGTGCAGGATCTATTGCTAGAATTTTTCAAGGGGAAGGATTTGTTCATGGGTATCAACCCAGATGAGGCTGTTGCTTATGGTGCAGCTGTTCAGGCTGCTAATTTGAGTGAAGGCTCTAAGAATGTCCCCAAGTTGGTGTTACAAGATGTTACCCCATTGTCACTTGGTGTTGCTGTATGTATTGAACAGTACATGGATGCGGTGATTCCTAGGAACACTTCCATACCTGTCAAGATAACAAAAAGATATCATAGCCTTTATGATAACCAGTGCTTTAATCGTATTCTTGTTTACGAGGGAGAGAGAGCAAGAGCTACTGACAATAATCTGCTTGGTTCATTTTGTCTTCCTTGTGTTCCAGGTCCCCGTGGCATGCCCTTGGATGTTTGCTTTTCCATTGATGAAAATGGCATCCAAACTGTTACTGCTAAGGAAGTACTTACAGGCATGATGAACGCGATCACCATAACAAATGACAAAGAAAGGTTGTCGGTGTCCGAAATTGAAAGAATGATTAAAGAAGCTGAGAAATACCATGTGGAAGATATGCAATTTTTAAGAAAGGCCAAGGTAATGAGTGCATTAGATTCTTGTGTTTACAATATGGAGAAGACTTTAAAGAAGAAGGATGTTAATCTGATGCTCTCCCCTCAAGAAATTGAGACGATCAACAATGCAATTATTGTTGCTATGAATTTGCTTGATAAGAATAACGGAGAGAAAGAAATAGATGTTCTTGAGGGTCATTTGAAGGCGCTGGAGAGCATGTCGAAACACCTTATATCCAAGGCTAATAGTTTTATTTTTCTTTGA 1899 0.3976 MDSIKKRKIMTKEYEGRAVGIDLGTTYSCVAVWLDEHHRVEIIHNDQGNRTTPSFVAFNNEQRLIGDAAKNQSATNPENTIFDAKRLIGRKFSDLVVQNDIKLWPFKVTSGVNDKPMITIKYKGEDKHFCAEEISSMVLAKMREVAEAYLGSSVKNAVITVPAYFNDSQRKATIDAGAIAGLNVIRIINEPTAAAIAYGLDKRSDIVGKRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEEFKKKNKMDISGNPKSLRRLRTACERAKRILSFAFVTTVEVDSLFMGIDFSSSITRAKFEELNMDFFNECMNIVDSCLRDSKIYKSDIDDIVLVGGSSRIPKVQDLLLEFFKGKDLFMGINPDEAVAYGAAVQAANLSEGSKNVPKLVLQDVTPLSLGVAVCIEQYMDAVIPRNTSIPVKITKRYHSLYDNQCFNRILVYEGERARATDNNLLGSFCLPCVPGPRGMPLDVCFSIDENGIQTVTAKEVLTGMMNAITITNDKERLSVSEIERMIKEAEKYHVEDMQFLRKAKVMSALDSCVYNMEKTLKKKDVNLMLSPQEIETINNAIIVAMNLLDKNNGEKEIDVLEGHLKALESMSKHLISKANSFIFL* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal3g0826 632 Gene3D - 203 377 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 157 177 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 17 30 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 486 502 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 406 425 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 69 77 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 47 59 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 348 364 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 380 400 - -
Mal3g0826 632 PRINTS 70kDa heat shock protein signature 220 230 - -
Mal3g0826 632 ProSitePatterns Heat shock hsp70 proteins family signature 3. 351 365 IPR018181 -
Mal3g0826 632 Gene3D - 19 395 - -
Mal3g0826 632 Gene3D - 554 627 IPR029048 -
Mal3g0826 632 Pfam Hsp70 protein 18 625 IPR013126 GO:0005524|GO:0140662
Mal3g0826 632 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 403 551 IPR029047 -
Mal3g0826 632 SUPERFAMILY Actin-like ATPase domain 18 202 IPR043129 -
Mal3g0826 632 Coils Coil 598 618 - -
Mal3g0826 632 SUPERFAMILY Actin-like ATPase domain 209 397 IPR043129 -
Mal3g0826 632 ProSitePatterns Heat shock hsp70 proteins family signature 1. 21 28 IPR018181 -
Mal3g0826 632 PANTHER HEAT SHOCK PROTEIN 70KDA 13 627 IPR013126 GO:0005524|GO:0140662
Mal3g0826 632 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 401 553 IPR029047 -
Mal3g0826 632 Gene3D - 82 137 - -
Mal3g0826 632 Gene3D Actin; Chain A, domain 4 246 329 - -
Mal3g0826 632 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 555 626 IPR029048 -
Mal3g0826 632 PANTHER HEAT SHOCK 70 KDA PROTEIN 13 627 - -
Mal3g0826 632 ProSitePatterns Heat shock hsp70 proteins family signature 2. 214 227 IPR018181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal3g0826 Mal-Chr3 32264795 32267423 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal3g0826 10 625 Calmodulin-binding Proteins AT3G09440 62.359 0.0 767